| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3417 |
|---|
| Symbol | gntP |
|---|
| ID | 1046240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3867732 |
|---|
| End bp | 3869084 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637146833 |
|---|
| Product | gluconate transporter |
|---|
| Protein accession | NP_745555 |
|---|
| Protein GI | 26990130 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.442053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.234684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAC TGGCTACTGA TACCTTCCTG CTGCTCGACG CGCTGGTTAC CATCGTCGGG
CTGATCCTGC TGATCACCCA CTTCAAGGTT CACCCCTTCG TCGCCCTCAC CCTCGCGGCC
GGCTTCCTGG GCCTGACTTC CGGCATGCCG GTGGCCAAGG TCATGAAATC GTTCCAGGAC
GGTTTTGGCG GCGTACTCGG CTTCGTCGGT ATCGTGCTCG CCCTGGGCAC CATGCTCGGC
AAGCTGATGG CCGACTCCGG TGGTGCCGAC CAGATCGCGC AAACCCTCAT CCGCGCCTTC
GGCAAGAAGA ACGTGCATTG GGCGATGATG TTCGCCGCCT TCCTGGTGGG CATCCCGCTG
TTCTTCGAAA TCGGCTTTGT GCTGCTGATT CCACTGGTGT TCATCGTCGC CCGGCGCTCG
GGCGTCTCGT TGGTGAAAAT CGGCATTCCG CTGCTGGCCG GCCTGTCGGT GGTGCACGGT
CTGGTGCCAC CACACCCGGG CCCCTTGCTG GCGATCGGCA TTTTCCACGC TGACATTGGC
AAGACCATCT TCTACGGCCT GATCGTCGCA CTGCCCACCG CGATCATCGC CGGCCCTCTG
TTCGGTAACT TCATTTCCCG CTACATCCCG GGCAACCCGT CCCAGGAGCT GATGGACCAG
ATCGCCAAGG ACTCCGATCA GGGCAACCTG CCAAGCTTCA GCATTACCCT GGTCACTGTA
CTGCTGCCGG TCGCGTTGAT GCTGCTGAAA ACGTTCGCCG ACGTGGTGCT GCCTGCCGAG
CACATCGTGC GCCAGTGGAT GGACCTGATC GGTCACCCGA TCACCGCCCT GCTCGCCGCC
CTGTTACTGG CCTTCTACAC CTTCGGCTCG GCCCGCGGCT TCAACCGCCA GCAGATCATG
AAGATGCTCG ACCAGAGCCT GGCACCGACT GCCGCCATCG TGCTGATCGT CGGCGCTGGC
GGTGGCTTCA AGCAAATGCT GGTGGATACC GGCGTAGGCA ACGTGATCGG GCAGATGGCT
GTCCAGGCAG AAATTTCGCC GATCATGCTG GCATGGCTGG TGGCGGCGGT GATCCGCATC
GCGACCGGCT CCGCCACGGT CGCCACCATC ACCGGCGCGG GTATCGTGGC ACCGGTGATC
GACCTCGTGC CGGGGGTGAA CCGTGAGCTG TTGGTACTGG CCACCGGTGC CGGCTCGCTG
ATCCTGTCGC ATGTGAACGA TGCCGGTTTC TGGCTGGTGA AGCAGTACTT CAACATGACC
GTGGCAGAAA CCTTCAAGAC CTGGAGCATG ATGGAGACGA TCCTGTCCAT CGTCGGCATC
ATTTTCATCA TGTTGCTGTC GCTGGTGGTG TGA
|
|---|
| Protein sequence | MFGLATDTFL LLDALVTIVG LILLITHFKV HPFVALTLAA GFLGLTSGMP VAKVMKSFQD
GFGGVLGFVG IVLALGTMLG KLMADSGGAD QIAQTLIRAF GKKNVHWAMM FAAFLVGIPL
FFEIGFVLLI PLVFIVARRS GVSLVKIGIP LLAGLSVVHG LVPPHPGPLL AIGIFHADIG
KTIFYGLIVA LPTAIIAGPL FGNFISRYIP GNPSQELMDQ IAKDSDQGNL PSFSITLVTV
LLPVALMLLK TFADVVLPAE HIVRQWMDLI GHPITALLAA LLLAFYTFGS ARGFNRQQIM
KMLDQSLAPT AAIVLIVGAG GGFKQMLVDT GVGNVIGQMA VQAEISPIML AWLVAAVIRI
ATGSATVATI TGAGIVAPVI DLVPGVNREL LVLATGAGSL ILSHVNDAGF WLVKQYFNMT
VAETFKTWSM METILSIVGI IFIMLLSLVV
|
|---|
| |