Gene PP_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3409 
Symbol 
ID1046190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3858740 
End bp3859129 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content66% 
IMG OID637146825 
Productcobalamin biosynthesis protein cobE, putative 
Protein accessionNP_745547 
Protein GI26990122 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.34231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGCCTG CCTTCTATGC CGGTTTTGGC TGCCGCCGGG GTTGCCCGGC GGATACCTTG 
CAACGCTTGC TGTGCCAGGC CCTGGACAAA CAGGGCCTGG CATTGGCTGA CCTGCGCGGT
ATCGCAAGCA TCAGCCTGAA GGCCGACGAG CCCGGCTTGT TGCAACTGGC AGAACACCTC
GGTTTGCCGT TGGTGCTGTA CCATGGCGCG CAACTGCAAC CCTATGAACC ACTGCTCAGC
CACCGTTCCG CCGTTGCTCA CCGGCACAGT GGCTGCTGGG GCGTAGCCGA AAGCGCGGCT
CTGGCCCTGG CCAGCCAGCG GCAGGGTACG GCCAGGCTGC TGCTGACGCG CCAGGTACTG
GGCCCGGCGA CGCTCGCCCT GGCCTGCTGA
 
Protein sequence
MMPAFYAGFG CRRGCPADTL QRLLCQALDK QGLALADLRG IASISLKADE PGLLQLAEHL 
GLPLVLYHGA QLQPYEPLLS HRSAVAHRHS GCWGVAESAA LALASQRQGT ARLLLTRQVL
GPATLALAC