Gene PP_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3397 
Symbol 
ID1046457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3848233 
End bp3850500 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content64% 
IMG OID637146815 
Producthypothetical protein 
Protein accessionNP_745537 
Protein GI26990112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.748182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC AAAGGCTCAG CCTTCAAGGA GGCAGCATGA ACACTTGGTC GCGCCGTGCG 
CTGTTGGCCG CCGGTTTCTC TCTTACCGTT ACCAGCGCCG CGTTCGCCGC GCTGTCTGAT
GTCGATCCGG GGCCCTACAC CTTCGCCACA GGTGGCTATC CGATGTGGTA CAAGGACAGC
CTCGACCAAT CCCTGGAGCT GTGCCAGTCG CGTGCCACCA GCACCCGTGC GCCAGGCGCA
CCCGGGGCGC CCGCCTACAT GTGCACCTTG TTGCCCGAGC CCGGGGTCTA TGACGATGCC
CTGCCGCTGG TATTTCCAGA TAACTGGCCA CCCGAGATGT TCTGGTTCCT GGCCGAAACC
TCGATACCAC AAGTCGGTAA CAGCGGATAT GAGCTGGAGG TCTACGTTGC CGGTATAGAG
GCAGCCTTTG CTGCTGAAAA CCCGGTAGAC GGTGATCAGC AAAGTTTCGC CCGCATCCGT
ATCCGCGCAT CGGTCCCACG CACCGGTACC TACACCATCA CGCACCCTTA CGGGGTGGAG
ACGGTCAACG TCACCACGGC AGGTCGTCGC GCGATCAACA TCACCCGGGA CATCGGTATC
GGCGCTCCGG GCAACTTCCA GGGGGCGCTG GCGGGGGCGA TCGGCCCTTG GCTGAAGGGG
GTTGGCGGGC CATATACAGA GGTCAACCCC GACACGGGCA CCACCGAAAC CTTCATCGGC
GACCCCAATA TCACCGAAGC GGTCACGGGT AGCCCCTTCA ATACCAACTT CGTGCGCATC
GAAGGGCCCG CGGGCGCCAT TCAGACCAAC ACGTTCACCG TGTCTGGCAA GGTGCTGGAC
CAGCGAGCAC AAACCCCGGT CACCCTGGAG CGCGCCACCT ATTCGCGCAA CGGCAGCGGC
ACCCGCGTGG AAGTGTTCGC CAAAGCCCCG AGTGAGGCCA GCCTGTGCAT GCGCAATGGC
CTGGCACTGA TCGGCACGCC GCCTTCGCCT TGTCAGTTCA CCCTGACTTC GGACAACAAC
GGGTTGTTCT TCAGCCAGCA GTTCAACCAG TCGGTGCCGC CAGCGGTGGT GGTTGTCACC
GCCAGCAACG CAGTCGGCGG CACCCAGCCG ACTGCGCTCT CGAGCAAACT CAGCGACGTG
GTCAAAGTCA GCACCGCACG CTATGACTGG GCCAACAAAC GTCTGTTGAT CGAGGCCAGC
TCCAGCGACG AAGTAGCGGT CCCCGACCTG CTCGCCCAAG GCTACGGCCG CATGTCGAAA
TCGGGCACGC TGCAAAGCAT CACGGTCAAC GATTTGGCTC AACCGCCCGC TACCGTTACG
GTCAAGTCTG CCCATGGCGG TAGTGATGTG GAGCCGGTGA TCGTGGTCGG CAGCGCCCCG
GTCGAGGCCG CCAACCAGCC ACCGCTGGCC CAGGCCGATG TTGGCAGCAC TAGTGTCGGT
GTACCGATCA CACTCAACCT GCTGCTGAAC GACAGCGACC CGGATGGCGA CGTGCCGCTG
ACCATCAGCG ACCTGACCCA ACCCGGGACC GGCCTTGGCG GCGTCGTGCT GAACGGCACC
ACCTCGGTTA CCTACACACC GCCGACCGGG GCCACACAAC CGCTGGTAGC CAACTTCAGC
TACCGGGCGG TGGATGCCAA GGGCCTGAAG TCGGAACCGG CCACGGTCAC CATCAACGTC
GCACCTAACC AGGCACCGAC TGCCAACCCG GAAACCGTCG CCACCTTGGG CGTGCCATTG
ACCATCAACG TGCTGGCCAA CGACACCGAT CCAGAAGGCA ACGTACCGCT GAGCGTGGCC
AACATCACCC AGCCGGCCGC CGGCCGTGGC ACGGTCAGCA CCGACGGCAC AACCGTGACC
TATACCCCAC CGGCCACTGT AACCACAGCC TTCACCACCA CCTTCACCTA CCAGGCACGT
GACTCACTGG GGGGTCTGTC CACCCCAAGT ACGGTCACCG TCAACGTGTC GCCTCGGCCT
GCCGCTGAAA CCTTCGCCGT CACGACAGCC ACGGTCACGG CGCGCTCCAA CAACCGTTAC
AACTGGGACA TCAGTGGCAC CTCGTCGGTG ACCACCGGCA ATACCGTAAC CGTGCGGGTA
ACCACTACCA CGGGCGTCCA GACCTTGGGG ACGGCCACGG TAGCGCTGAC CGGCCGCTGG
CGCCTGGTGG TAAGCAATAG CACCACGATC ATCCCGACTG CGGCACCGAC GGCGACGATC
ACCACCAGCC AAGGCACCAC GCGCACCGTC AACGTAGTCG TGCAGTAA
 
Protein sequence
MNRQRLSLQG GSMNTWSRRA LLAAGFSLTV TSAAFAALSD VDPGPYTFAT GGYPMWYKDS 
LDQSLELCQS RATSTRAPGA PGAPAYMCTL LPEPGVYDDA LPLVFPDNWP PEMFWFLAET
SIPQVGNSGY ELEVYVAGIE AAFAAENPVD GDQQSFARIR IRASVPRTGT YTITHPYGVE
TVNVTTAGRR AINITRDIGI GAPGNFQGAL AGAIGPWLKG VGGPYTEVNP DTGTTETFIG
DPNITEAVTG SPFNTNFVRI EGPAGAIQTN TFTVSGKVLD QRAQTPVTLE RATYSRNGSG
TRVEVFAKAP SEASLCMRNG LALIGTPPSP CQFTLTSDNN GLFFSQQFNQ SVPPAVVVVT
ASNAVGGTQP TALSSKLSDV VKVSTARYDW ANKRLLIEAS SSDEVAVPDL LAQGYGRMSK
SGTLQSITVN DLAQPPATVT VKSAHGGSDV EPVIVVGSAP VEAANQPPLA QADVGSTSVG
VPITLNLLLN DSDPDGDVPL TISDLTQPGT GLGGVVLNGT TSVTYTPPTG ATQPLVANFS
YRAVDAKGLK SEPATVTINV APNQAPTANP ETVATLGVPL TINVLANDTD PEGNVPLSVA
NITQPAAGRG TVSTDGTTVT YTPPATVTTA FTTTFTYQAR DSLGGLSTPS TVTVNVSPRP
AAETFAVTTA TVTARSNNRY NWDISGTSSV TTGNTVTVRV TTTTGVQTLG TATVALTGRW
RLVVSNSTTI IPTAAPTATI TTSQGTTRTV NVVVQ