| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3394 |
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| Symbol | |
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| ID | 1046769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3844701 |
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| End bp | 3845630 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146812 |
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| Product | 3-hydroxy-3-methylglutaryl-CoA lyase, putative |
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| Protein accession | NP_745534 |
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| Protein GI | 26990109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.461441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TAACAATCAA TGAAGTCGGC CTGCGCGATG GCTTGCAGAG CCTGCAAGTG
ATCATGCCGA CAGCAGCCAA ACGCCGCTGG ATCGACGCCG CTTACGGCGC CGGCGTGCGC
CATATGGAAG TCGCGTCGTT CGTGCCGGCA CGCTTGCTGC CGCAGATGGC CGATGCCCGC
GAAGTGGTGG CTCACGCCCT CACGTACCCG GACCTGCAAG TAACCGTGCT GGCTCCAAAC
CTTCGTGGCG CAAGGGACGC ACTTGAATCG GGGGCACACC GCATCGTCGC CCCGGTATCG
GTGAGCACGG CGCACAGCCT GGCCAACGTG CGCCGCACGC CAGTGGAGAT GGTCGAGGAA
CTGGGGCGCA TGTGCCAGCT GCGTACTGAA ATGGGCCTGC ATGGGGTGCA AGTCGTGGCC
GGCATGTCAG TGGCCTTTGG CTGCACCCGC CAGGGCGAGG TGCCGCTGGC TGACCTGTGT
GCGTTGACCC GCCAGGTGAT CGAAGCCGGT TGCGACCTGG TCTCCCTGGG GGACACCACT
GGCTATGCCA ATCCGGGCCA GGTGGCAATG GTGCTTCAGG CCGTACGGGA GATTGCAGGC
GACCGTCTCA AGGCCGCGCA CTTCCATGAC ACCCGGGGCC TGGCCTTGGC CAACAGCCTG
GTGGCGGTGC AGCAGGGCAT TGGGGAACTG GATGCCTCCC TGGCGGGCCT GGGAGGCTGC
CCGTTCGCCC CTGGCGCGTC TGGTAATACC GTGACCGAGG ACCTGGTGTT CATGCTGCAA
AGCATGGGCT ACGACACCGG CATCGACTTG CCTGCGCTAA TCGAAACCCG GCAGGTACTA
AGCGAAGCGC TACCGGGCGA GCCACTTTAC GGCTTCATCG CCCGGGCCGG ATTGCCGCTC
AACTTCGCCA ACACACACCG CCACGCCTGA
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| Protein sequence | MTTITINEVG LRDGLQSLQV IMPTAAKRRW IDAAYGAGVR HMEVASFVPA RLLPQMADAR
EVVAHALTYP DLQVTVLAPN LRGARDALES GAHRIVAPVS VSTAHSLANV RRTPVEMVEE
LGRMCQLRTE MGLHGVQVVA GMSVAFGCTR QGEVPLADLC ALTRQVIEAG CDLVSLGDTT
GYANPGQVAM VLQAVREIAG DRLKAAHFHD TRGLALANSL VAVQQGIGEL DASLAGLGGC
PFAPGASGNT VTEDLVFMLQ SMGYDTGIDL PALIETRQVL SEALPGEPLY GFIARAGLPL
NFANTHRHA
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