Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3388 |
Symbol | |
ID | 1046523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3836403 |
End bp | 3839075 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637146806 |
Product | hypothetical protein |
Protein accession | NP_745528 |
Protein GI | 26990103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.634458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCAC TCAGCGAAAC CCTCGAACTA TGCAGGCGCA TCACCTCCGG CTACCGCCCG GCCCTGCGCA ACAGCCCCGT CGCCGACTGC ACCCGCCGCT TCGAACTGCT GCCCCTGCGC TACGCCGCCG TCGGCGGCAA CCCGGCACAA CGTGCCCGCC TGCCCAAATT GCCGAGCTAT CTCAGCCCGT TCCAGGAGGT CGGCGAGCTG ACCCATTCCA GCTACGCCAT CCGCCCTTTG CGCGAGGGCT TTCTCTACCT GCTGATCAAG CGCCATAGCG CGCCGGCCTA CGAATGGCAC AGCCAGTACC GCGTGGCACC CAATGGTTCG CTGCTGTACA TCAGCGCCGA CGCACCGTGG GAGCCCGCCC CCCTCACTGG CAATCTGGAT GACATCATCC GCAGCTTCGG CTGGACCATC ACCCTCTACG ACCTCGACGA CATCCAGGAA CTGCGTCCGC TTTTTAGCCC TTCCCCACTC ACTCCGCGCC TGCTCGACAA CTACCGCCTC CTCGAAGACG AATACCGCAA CAGCCTGCCC GCCATCGATA TCGCCCGCTT CATCCAGCCC TCCGACGCCC CGCCGCAGCC CCATGTGCTC AAGCACGACC AACTGAACTG GGTAGCCGAC TTCAAGGCCC AGGACGATGC CGACCTGCAG GCGCTACTGG ACCTGCAGCC GTTCAACAAC GACCAGATCG TCTCGCCCCA CGCCTCACGC CTGGCCCTGG CGCCGCCGGT GAACCAGACC AAACCCCGTG GCGCCGCCAT CGTCATCGAA GATGCCATCG GCATTACCCA GGAGCTCAAC GCCTGGCGCA ATGCCGCCGT CGATGATGTG AAAACGAAAT GGCTGGAACG CACCGTTGAA CCCGGCGTGG ACAACGAGCG CAAGCTTCTG GTCGCGCAGT CGTTCCTGGA AATCGAAAAA CTCTACCCAC AGATGGTGGC CGAGGAGATC GTCAAGCGCG AAGTCATGGC CGAAAAAGTC CGCAACCAGC TCCACCTGCA TCCCGAGATC TACTTGTTCT CCGAACGGGC CAGGCAACAG GCCGATGCCC ATGATGAACG CCTGAAGCCG CACATGGCGC AGTTCGAGCG CGGCGTCCGC AGCAAAGTCC AGGCCCGTCA GGATGCCGGC GAGTTCCGCA AGCGGTTCGA TCAGAAATAC GGCCACCTGG TCGACCGCCA GGCCATGCAC GATCAGCTCG ACGGTTTCGA GCAGGCCATG CAACACGCCC AGCAAGCCGC CGAAGACCGC GCCAACGACC ATACCCGCTG GGTGGTCAGC GAACGCTTAT TGCAAGCGCT GGACCGCTAC GACAACGCCG ACCTCATCAA CGGCCTGGCC TTTGCCGAAC AGACCGGCCA GTGCGTGATC GGCATGGAGT TGAGTGAAGG GGGCACGAAG GTACTGGACC ACTGGTGGCG CAGTGACGTG GCAGACCGGG GCAACCTGGC AATACGCGGC ATCACCTACA ACCAGGAGGA CCTGCGGGAA GAACTGGCGG CGCTGCTGGA AGCCGCCAAG GCCGAACCGC CGTCAGCGTC ATCCTTCGCC CTGCCGGAAG CGCTTGCCAG GCAAGCCCAT GCCGCTGCCA ATGCCTTTGG GCGCATCAAC ACCCTGTACG AACAGATGCA GGCACAGAGC AGCACGGCCA GCATCGGCCT GTATGCCTGG TACGTCGCGC TGGGGCGGCA AGTGCTGCGC ACCGCCACCC CCAACAGCAT GGACCGCGCG CTGCACCAGG GTTTGCGGCT GACTTTGTTC GCTTCGGTGC ATGAAACGGC TGTCGATATT CGCCTGAGTG AAGCTGCACG TAGCGGGCAG CCCATCAACC CACAACGCAG CGCAGGCCAG GTATCAAGGT ACCTCGACCA GGCTTGGGCT GAAGGGTTGA TGCAGGCCCG GAACAGTGAC TTCTACAAAG TGCGTGTTTC TGGGCTGGTG TGCCTGCTGG AGGGGATGCT GATGGCCTTC AAAGCGCGCG AATTGCCTGA CAGTGATGCG CGGGTGAAGA CCGAACTTCT GGCGGCCGCG ATGACTACGG CTGCGGCGGG CTTCGAAGTT GGAGCCAGTT ACGTGGATCA GGTGGTCGCG CGGTACGGCG CGAACAGTGT GACCGGACGA GGAGCAGCGG CCGCTTTAGG GCGTTTGAAA CTATGGGGCG CCAGTTTAGC TGTGACAGGT GGTTTCGTAC TCGCCTGGTG GGACTTCGCC GATGCGGCTC AGCAGTTAAT ATACCGCCAG CAAAACCTTA CCAAACATAG TACCAAAAAA CCTGGAACGC TGGCACTTGC ATACGCATCG CGGGCACTGG CAACTATTAC AATCTCGCTG GCGGAAGCAG GAACAGCCAT TGCAATCGCA AAACCTCTTT TTGACCATCT ATCTCAGAAT GCCAAAACAA AACTTGTGAG AATGATGACA ACATCCATGG GCGCGCTCGC CAACAAACTG GGAACACAAG CTGCTCGCCT ACTGCTTGCA CGTTTAGTAT TAGGTGCATT TTGGATCGGA GTCATCCTGA CACTCATAAT CTACATTCTG GAAGATGACG CTTTAGAGAA GTGGTGCAAA CGTAGCTGCT TCCGAACTCA TAAAAATATC AAACCCTATG AAGAGCAGGA AGAACTGAGT GCCCTACACA CTGCTATCGG CGAGGTTTTA TAA
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Protein sequence | MDSLSETLEL CRRITSGYRP ALRNSPVADC TRRFELLPLR YAAVGGNPAQ RARLPKLPSY LSPFQEVGEL THSSYAIRPL REGFLYLLIK RHSAPAYEWH SQYRVAPNGS LLYISADAPW EPAPLTGNLD DIIRSFGWTI TLYDLDDIQE LRPLFSPSPL TPRLLDNYRL LEDEYRNSLP AIDIARFIQP SDAPPQPHVL KHDQLNWVAD FKAQDDADLQ ALLDLQPFNN DQIVSPHASR LALAPPVNQT KPRGAAIVIE DAIGITQELN AWRNAAVDDV KTKWLERTVE PGVDNERKLL VAQSFLEIEK LYPQMVAEEI VKREVMAEKV RNQLHLHPEI YLFSERARQQ ADAHDERLKP HMAQFERGVR SKVQARQDAG EFRKRFDQKY GHLVDRQAMH DQLDGFEQAM QHAQQAAEDR ANDHTRWVVS ERLLQALDRY DNADLINGLA FAEQTGQCVI GMELSEGGTK VLDHWWRSDV ADRGNLAIRG ITYNQEDLRE ELAALLEAAK AEPPSASSFA LPEALARQAH AAANAFGRIN TLYEQMQAQS STASIGLYAW YVALGRQVLR TATPNSMDRA LHQGLRLTLF ASVHETAVDI RLSEAARSGQ PINPQRSAGQ VSRYLDQAWA EGLMQARNSD FYKVRVSGLV CLLEGMLMAF KARELPDSDA RVKTELLAAA MTTAAAGFEV GASYVDQVVA RYGANSVTGR GAAAALGRLK LWGASLAVTG GFVLAWWDFA DAAQQLIYRQ QNLTKHSTKK PGTLALAYAS RALATITISL AEAGTAIAIA KPLFDHLSQN AKTKLVRMMT TSMGALANKL GTQAARLLLA RLVLGAFWIG VILTLIIYIL EDDALEKWCK RSCFRTHKNI KPYEEQEELS ALHTAIGEVL
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