Gene PP_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3388 
Symbol 
ID1046523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3836403 
End bp3839075 
Gene Length2673 bp 
Protein Length890 aa 
Translation table11 
GC content60% 
IMG OID637146806 
Producthypothetical protein 
Protein accessionNP_745528 
Protein GI26990103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.634458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCAC TCAGCGAAAC CCTCGAACTA TGCAGGCGCA TCACCTCCGG CTACCGCCCG 
GCCCTGCGCA ACAGCCCCGT CGCCGACTGC ACCCGCCGCT TCGAACTGCT GCCCCTGCGC
TACGCCGCCG TCGGCGGCAA CCCGGCACAA CGTGCCCGCC TGCCCAAATT GCCGAGCTAT
CTCAGCCCGT TCCAGGAGGT CGGCGAGCTG ACCCATTCCA GCTACGCCAT CCGCCCTTTG
CGCGAGGGCT TTCTCTACCT GCTGATCAAG CGCCATAGCG CGCCGGCCTA CGAATGGCAC
AGCCAGTACC GCGTGGCACC CAATGGTTCG CTGCTGTACA TCAGCGCCGA CGCACCGTGG
GAGCCCGCCC CCCTCACTGG CAATCTGGAT GACATCATCC GCAGCTTCGG CTGGACCATC
ACCCTCTACG ACCTCGACGA CATCCAGGAA CTGCGTCCGC TTTTTAGCCC TTCCCCACTC
ACTCCGCGCC TGCTCGACAA CTACCGCCTC CTCGAAGACG AATACCGCAA CAGCCTGCCC
GCCATCGATA TCGCCCGCTT CATCCAGCCC TCCGACGCCC CGCCGCAGCC CCATGTGCTC
AAGCACGACC AACTGAACTG GGTAGCCGAC TTCAAGGCCC AGGACGATGC CGACCTGCAG
GCGCTACTGG ACCTGCAGCC GTTCAACAAC GACCAGATCG TCTCGCCCCA CGCCTCACGC
CTGGCCCTGG CGCCGCCGGT GAACCAGACC AAACCCCGTG GCGCCGCCAT CGTCATCGAA
GATGCCATCG GCATTACCCA GGAGCTCAAC GCCTGGCGCA ATGCCGCCGT CGATGATGTG
AAAACGAAAT GGCTGGAACG CACCGTTGAA CCCGGCGTGG ACAACGAGCG CAAGCTTCTG
GTCGCGCAGT CGTTCCTGGA AATCGAAAAA CTCTACCCAC AGATGGTGGC CGAGGAGATC
GTCAAGCGCG AAGTCATGGC CGAAAAAGTC CGCAACCAGC TCCACCTGCA TCCCGAGATC
TACTTGTTCT CCGAACGGGC CAGGCAACAG GCCGATGCCC ATGATGAACG CCTGAAGCCG
CACATGGCGC AGTTCGAGCG CGGCGTCCGC AGCAAAGTCC AGGCCCGTCA GGATGCCGGC
GAGTTCCGCA AGCGGTTCGA TCAGAAATAC GGCCACCTGG TCGACCGCCA GGCCATGCAC
GATCAGCTCG ACGGTTTCGA GCAGGCCATG CAACACGCCC AGCAAGCCGC CGAAGACCGC
GCCAACGACC ATACCCGCTG GGTGGTCAGC GAACGCTTAT TGCAAGCGCT GGACCGCTAC
GACAACGCCG ACCTCATCAA CGGCCTGGCC TTTGCCGAAC AGACCGGCCA GTGCGTGATC
GGCATGGAGT TGAGTGAAGG GGGCACGAAG GTACTGGACC ACTGGTGGCG CAGTGACGTG
GCAGACCGGG GCAACCTGGC AATACGCGGC ATCACCTACA ACCAGGAGGA CCTGCGGGAA
GAACTGGCGG CGCTGCTGGA AGCCGCCAAG GCCGAACCGC CGTCAGCGTC ATCCTTCGCC
CTGCCGGAAG CGCTTGCCAG GCAAGCCCAT GCCGCTGCCA ATGCCTTTGG GCGCATCAAC
ACCCTGTACG AACAGATGCA GGCACAGAGC AGCACGGCCA GCATCGGCCT GTATGCCTGG
TACGTCGCGC TGGGGCGGCA AGTGCTGCGC ACCGCCACCC CCAACAGCAT GGACCGCGCG
CTGCACCAGG GTTTGCGGCT GACTTTGTTC GCTTCGGTGC ATGAAACGGC TGTCGATATT
CGCCTGAGTG AAGCTGCACG TAGCGGGCAG CCCATCAACC CACAACGCAG CGCAGGCCAG
GTATCAAGGT ACCTCGACCA GGCTTGGGCT GAAGGGTTGA TGCAGGCCCG GAACAGTGAC
TTCTACAAAG TGCGTGTTTC TGGGCTGGTG TGCCTGCTGG AGGGGATGCT GATGGCCTTC
AAAGCGCGCG AATTGCCTGA CAGTGATGCG CGGGTGAAGA CCGAACTTCT GGCGGCCGCG
ATGACTACGG CTGCGGCGGG CTTCGAAGTT GGAGCCAGTT ACGTGGATCA GGTGGTCGCG
CGGTACGGCG CGAACAGTGT GACCGGACGA GGAGCAGCGG CCGCTTTAGG GCGTTTGAAA
CTATGGGGCG CCAGTTTAGC TGTGACAGGT GGTTTCGTAC TCGCCTGGTG GGACTTCGCC
GATGCGGCTC AGCAGTTAAT ATACCGCCAG CAAAACCTTA CCAAACATAG TACCAAAAAA
CCTGGAACGC TGGCACTTGC ATACGCATCG CGGGCACTGG CAACTATTAC AATCTCGCTG
GCGGAAGCAG GAACAGCCAT TGCAATCGCA AAACCTCTTT TTGACCATCT ATCTCAGAAT
GCCAAAACAA AACTTGTGAG AATGATGACA ACATCCATGG GCGCGCTCGC CAACAAACTG
GGAACACAAG CTGCTCGCCT ACTGCTTGCA CGTTTAGTAT TAGGTGCATT TTGGATCGGA
GTCATCCTGA CACTCATAAT CTACATTCTG GAAGATGACG CTTTAGAGAA GTGGTGCAAA
CGTAGCTGCT TCCGAACTCA TAAAAATATC AAACCCTATG AAGAGCAGGA AGAACTGAGT
GCCCTACACA CTGCTATCGG CGAGGTTTTA TAA
 
Protein sequence
MDSLSETLEL CRRITSGYRP ALRNSPVADC TRRFELLPLR YAAVGGNPAQ RARLPKLPSY 
LSPFQEVGEL THSSYAIRPL REGFLYLLIK RHSAPAYEWH SQYRVAPNGS LLYISADAPW
EPAPLTGNLD DIIRSFGWTI TLYDLDDIQE LRPLFSPSPL TPRLLDNYRL LEDEYRNSLP
AIDIARFIQP SDAPPQPHVL KHDQLNWVAD FKAQDDADLQ ALLDLQPFNN DQIVSPHASR
LALAPPVNQT KPRGAAIVIE DAIGITQELN AWRNAAVDDV KTKWLERTVE PGVDNERKLL
VAQSFLEIEK LYPQMVAEEI VKREVMAEKV RNQLHLHPEI YLFSERARQQ ADAHDERLKP
HMAQFERGVR SKVQARQDAG EFRKRFDQKY GHLVDRQAMH DQLDGFEQAM QHAQQAAEDR
ANDHTRWVVS ERLLQALDRY DNADLINGLA FAEQTGQCVI GMELSEGGTK VLDHWWRSDV
ADRGNLAIRG ITYNQEDLRE ELAALLEAAK AEPPSASSFA LPEALARQAH AAANAFGRIN
TLYEQMQAQS STASIGLYAW YVALGRQVLR TATPNSMDRA LHQGLRLTLF ASVHETAVDI
RLSEAARSGQ PINPQRSAGQ VSRYLDQAWA EGLMQARNSD FYKVRVSGLV CLLEGMLMAF
KARELPDSDA RVKTELLAAA MTTAAAGFEV GASYVDQVVA RYGANSVTGR GAAAALGRLK
LWGASLAVTG GFVLAWWDFA DAAQQLIYRQ QNLTKHSTKK PGTLALAYAS RALATITISL
AEAGTAIAIA KPLFDHLSQN AKTKLVRMMT TSMGALANKL GTQAARLLLA RLVLGAFWIG
VILTLIIYIL EDDALEKWCK RSCFRTHKNI KPYEEQEELS ALHTAIGEVL