| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3386 |
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| Symbol | vgrG-2 |
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| ID | 1046531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3833333 |
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| End bp | 3835510 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146804 |
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| Product | vgrG protein |
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| Protein accession | NP_745526 |
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| Protein GI | 26990101 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.160309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.824381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC AATCCGATCT GCGCTTCACT TTCCAGCCGC TGGTTGGCCG TAGCGAGTTT
GAGGTGGTGT CGTTCGAACT GGACGAAGCC ATCAGCTCCC CGTTCCGACT ACAACTGGAG
CTGGTCAGTT TCGAAGACGA TGTCGACTTC GCCCAGCTCC TCGACAAACC GGTGCTCTTC
ACCCTCTGGC AGGGTGAGCG CCCGTTGCGC TACGTGCACG GCCTGGTCAG CACCTTCAGC
CAGGGAGAAA CAGGCTTCGA TCGCACCCGT TACCGGGCAC TGGTCGAGCC CGTGCTGGCC
CGCGCCGGGC TGCGCTCGAA CTGGCGCATC TTCCAGCAGA AAACCGTGCC GCAGATTCTC
GAGATCATGC TCAAGCGCCA GGGCGTGAAT GCCTACGAGC TCAAGTGTCT CGACCCGCAT
CAGGTGCGCG AATTTTGCGT GCAGGCCGGT GAAACAGACC TCGACTTCAT GGCCCGCCTG
GCCGCCGAGG AAGGCATTGT CTACCGCTTC GACCACACGC CGAAACAGCA CTTGCTAATC
ATCACTGACC GGCTGCTGGC GCTGGGCCAG ATCAGCCGGG GGGCCATCAA GACCGATGAT
GAGGATGAAG GGTTTCACAA TGACGACGTG GGCCCCGATC AGGTGCTGTA CCGATCCGTT
GGAGGCGGCG ATCAGGCCAG GCCTTGCCTG CGGCGCTTGC GTTACAGCGA ACAGGTTCGA
ACAGCGCGGC AGGTGCAACG GGACTACACC TTCACTCATC CACAATACCG TCAGGAACAC
CAGGCTTACG ACAATAGCAA CACCCATCAA TCGCTGAACT ATGAGCGCTT CGACTACCCC
GGCCGATACA AGCGTGATGC GGTCGGGGTT CCGTTCACTG CCACCCGCCT CACGGCCCTG
CGCCATGATG CACGCATTGC CGAAGTGGAA GGCGACGATG TGCGCCTGCA ACCGGGGCTG
AGCTTCACCC TCATCGAGCA CCCGCGTGAA GACCTCAACG TGCACTGGCG CACGGTCAGC
GTGCATCACG AAGGCACCCA GTTCACCAGC CTGCAGGAAG AGGCCGCCGA CTCGCAGCAA
GGCACCCGCT ACAAACAGGA AGCATTGCTG GTTCCCGGCA GGACCGAATG GCGCCCGGCC
CCCCTGCCCA AGCCACGCAT CGACGGCCCG CACATGGCGA CGGTGGTCGG GCCCAAGGGC
GAGGAAATCT ATTGCGACCA ATGGGGCCGG GTGAAAGTGA GCTTTCCTTG GGACCGGGAA
AGCGAAAACA ACGAGTTCAG CTCCTGCTGG GTGCGCGTGT CGCAAGGTTG GGCGGGGGGC
AGCTGGGGTT CGATGGCCAT CCCGCGCATC GGCCAGGATG TGATCATCCA GTACGTCAAC
GCCGACCCGG ACCAGCCGAT GATCACCGGG CGCACCTATT GCGGTAACCA GTTGCCGCCC
TATGACCTGC CCGAGCACAA GACGCGCATG ACCATCAAGA GCCAGACCCA TAAAGGCGAA
GGCTTCAACG AGCTGCGCTT CGAGGATGAA CTGGGTCGGC AGGAGGTGTT CATTCATGCC
GAGCGGGACC AGAACAACAT CGTCAAGCAC GACGAAACCA CACGCGTGGG TAACGATCGT
ACCGAACGCG TCGAACGAGA CGAGACGATT TCGATCGGTC AGGACCGTCG CGAAGACATT
GCCCGTGACG AGTCTGTTGG CATCGGCCAG AACCGGGTAC ACGAAATCGG CAACGACGAC
AGCCTGAGCA TCGGCCGCAA CCACAGGATC ACCACAGGCA AGGACCGAAT CGAACAGGTA
GGGAACCACC GGCAGGACAT CACCAAGGCA AACCACACGG TAGAAATCGG CGGCCACCGC
GAACAGGTCG TTGCCGGTCA CAGCACGTTG CAAACGGGCG AAGCCATCCG GCACACCACC
AAGGTTTATG ACATCCAGGT CAGCGAAAGC CTGACGATCC GCAGCCCCGC AGGGCTTTTG
AGAGTAGACG GCGCCGGTAT AACGCTGGAC GGCCTGGCGC TGGCCTTCAA AGGGCCTGTC
AGCCAGCAGG CTACGGGTAG CAATCGCGTC ACTTCAACGT CTGGCGTACC AGCGCCTGGC
GAACCCATTT GCCTCAGCTG CCTGCTCAAG GCGATCGCCG ACGGCCACAC CATCATTCGC
ATGGAAGGAG CAAGCTGA
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| Protein sequence | MPSQSDLRFT FQPLVGRSEF EVVSFELDEA ISSPFRLQLE LVSFEDDVDF AQLLDKPVLF
TLWQGERPLR YVHGLVSTFS QGETGFDRTR YRALVEPVLA RAGLRSNWRI FQQKTVPQIL
EIMLKRQGVN AYELKCLDPH QVREFCVQAG ETDLDFMARL AAEEGIVYRF DHTPKQHLLI
ITDRLLALGQ ISRGAIKTDD EDEGFHNDDV GPDQVLYRSV GGGDQARPCL RRLRYSEQVR
TARQVQRDYT FTHPQYRQEH QAYDNSNTHQ SLNYERFDYP GRYKRDAVGV PFTATRLTAL
RHDARIAEVE GDDVRLQPGL SFTLIEHPRE DLNVHWRTVS VHHEGTQFTS LQEEAADSQQ
GTRYKQEALL VPGRTEWRPA PLPKPRIDGP HMATVVGPKG EEIYCDQWGR VKVSFPWDRE
SENNEFSSCW VRVSQGWAGG SWGSMAIPRI GQDVIIQYVN ADPDQPMITG RTYCGNQLPP
YDLPEHKTRM TIKSQTHKGE GFNELRFEDE LGRQEVFIHA ERDQNNIVKH DETTRVGNDR
TERVERDETI SIGQDRREDI ARDESVGIGQ NRVHEIGNDD SLSIGRNHRI TTGKDRIEQV
GNHRQDITKA NHTVEIGGHR EQVVAGHSTL QTGEAIRHTT KVYDIQVSES LTIRSPAGLL
RVDGAGITLD GLALAFKGPV SQQATGSNRV TSTSGVPAPG EPICLSCLLK AIADGHTIIR
MEGAS
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