| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3383 |
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| Symbol | |
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| ID | 1046533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3829592 |
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| End bp | 3831376 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146801 |
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| Product | gluconate 2-dehydrogenase acceptor subunit |
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| Protein accession | NP_745523 |
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| Protein GI | 26990098 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.597308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGG TGTTGAACAA AGTGGATGCG GTGATCGTCG GCTTCGGCTG GGCCGGTGCG
ATCATGGCCA AAGAGCTGAC CGAGGCCGGG CTGCACGTGG TAGCCCTGGA GCGGGGGCCG
ATGCAGGATA CCTACCCCGA AGGCAGCTAC CCGCAGGTGA TCGATGAGCT GACCTACAGC
GTGCGCAAGA AGCTGTTCGT CGATGTATCG AAAGAAACCG TCACTGTCCG CCATAGCGTG
AATGACGTGG CATTGCCCAA TCGCCAGCTG GGCGCATTCC TGCCGGGCAA GGGCGTGGGG
GGCGCGGGCC TGCACTGGTC GGGTGTGCAC TTCCGGGTCG ACCCCGTCGA GTTGCGCCTG
CGCAGCCACT ATGAAGAGCG CTACGGGCGC ACGTTCATTC CCGAAGGCAT GACTATCCAG
GACTTCGGCG TCAGTTACGA AGAGCTGGAG CCCTATTTCG ACTTTGCCGA AAAGGTCTTT
GGCACTTCAG GCCAGGCCTG GACCGTCAAA GGCCAGGTGG TCGGTGAAGG GAAGGGCGGC
AACCCCTATG CGCCGGACCG TTCCAACCCG TTCCCGCTGC CCGCGCAGAA GAACGTTGTA
TCGGCAAGGC TGTTCGAAAA GGCTGCCACC AGCCTGGGCT ACAAACCCTA CAACCTGCCG
TCGGCCAACA CGTCGGGGCC ATACACCAAC CCCTACGGGG CGCAGATGGG GCCTTGCAAC
TTCTGCGGTT TCTGCAGCGG CTACGTGTGT TACATGTACT CCAAGGCCTC GCCCAACGTG
AATATCCTGC CGGCGCTGCG CCAGGTGCCC AACTTCGAGT TGCGGCCCAA TGCCCATGTG
CTGCGGGTGA ACCTGGACGA CAGCAAGCGC AGGGCCACCG GCGTGACCTA CATCGATGCC
CAGGGGCGCG AGGTGGAGCA GCCGGCAGAG CTGGTGATTC TGGCGGCGTT CCAGTTCAAC
AACGTGCGTC TGATGCTGCT TTCCGGCATT GGCAAACCTT ACGACCCGGT AAAGAACGAG
GGTGTGGTCG GGCGTAACTT CGCCTATCAG AACATGGGTA CAGTGAAGGC GTTCTTCGAC
AAGGACACCT ACACCAACAA CTTCATCGGC GCGGGTGGCA ATGGCATTGC CATCGACGAT
TTCAACGCCG ACAACTTCGA CCATGGCCCG CACGGCTTCG TCGGCGGTTC GCCAATGTGG
GTGAACCAGG CCGGCAGCCG GCCGATTGCC GGTACCTCCA ACCCGCCGGG CACTCCGGCC
TGGGGCAGTG CCTGGAAGAA AGCCACGGCC GACTACTACA CCCACCAGGT GTCGATGGAC
GCCCACGGCG CACACCAGTC CTACCGTGGC AATTACCTGG ACCTGGACCC CACCTACCGC
GATGCCTACG GTCAGCCGCT GCTGCGCATG ACGTTCGACT GGCAGGAAAA CGACATCAAG
ATGAACCAGT TCATGGTCGA CAAGCTGAGC AAGATCGCCC AGGCGATGAA CCCCAAGGCC
ATTGCCGTGC TGGGCAAGCA GGTCAAGGAC CACTTCAACA CCACCAGTTA CCAGACCACC
CACCTGAACG GTGGGGCGAT CATGGGCACT GACCCCAAGA CCAGTGCACT GAACCGCTAC
CTGCAAAGCT GGGACGTACA CAACGTGTTC GTTCCGGGGG CTTCGGCGTT CCCGCAGGGG
CTGGGTTACA ACCCGACCGG GCTGGTGGCT GCGCTCACGT ACTGGTCGGC CCGCGCCATC
CGTGAGCAGT ACCTGAAAAA CCCCGGTCCG TTGGTCCAGG CTTGA
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| Protein sequence | MATVLNKVDA VIVGFGWAGA IMAKELTEAG LHVVALERGP MQDTYPEGSY PQVIDELTYS
VRKKLFVDVS KETVTVRHSV NDVALPNRQL GAFLPGKGVG GAGLHWSGVH FRVDPVELRL
RSHYEERYGR TFIPEGMTIQ DFGVSYEELE PYFDFAEKVF GTSGQAWTVK GQVVGEGKGG
NPYAPDRSNP FPLPAQKNVV SARLFEKAAT SLGYKPYNLP SANTSGPYTN PYGAQMGPCN
FCGFCSGYVC YMYSKASPNV NILPALRQVP NFELRPNAHV LRVNLDDSKR RATGVTYIDA
QGREVEQPAE LVILAAFQFN NVRLMLLSGI GKPYDPVKNE GVVGRNFAYQ NMGTVKAFFD
KDTYTNNFIG AGGNGIAIDD FNADNFDHGP HGFVGGSPMW VNQAGSRPIA GTSNPPGTPA
WGSAWKKATA DYYTHQVSMD AHGAHQSYRG NYLDLDPTYR DAYGQPLLRM TFDWQENDIK
MNQFMVDKLS KIAQAMNPKA IAVLGKQVKD HFNTTSYQTT HLNGGAIMGT DPKTSALNRY
LQSWDVHNVF VPGASAFPQG LGYNPTGLVA ALTYWSARAI REQYLKNPGP LVQA
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