Gene PP_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3375 
SymbolendA-2 
ID1047019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3819907 
End bp3820872 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID637146793 
Productdeoxyribonuclease I 
Protein accessionNP_745515 
Protein GI26990090 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.205307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TGCTTTACGC CGTAACCTTA TTATTTTCCT TTACCCTCCC CGCTCTGGCC 
AACCCGCCGG CCACCTTCAC CGAAGCCAAG GTGGTGGCCA AGCAGAAGGT CTACCTGGAC
CAGGCCAGCA GTGCCATGGG CGACCTGTAC TGCGGTTGCA AATGGACCTG GGTGGGCAAG
TCTGGCGGGC GCATCGACGC TGCCTCGTGT GGTTACCAGA CACGCAAGCA GCAGAACCGT
GCCGAACGCA CCGAGTGGGA ACACATCGTG CCCGCCCACA CCTTCGGCAA CCAGCGCCAG
TGCTGGAAGA ACGGCGGCCG TGAGCACTGC GTGGACAACG ACCCGGTGTT CCGCGCCATG
GAGGCCGACC TGTTCAACCT TTACCCGGCC GTGGGTGAGG TCAACGGTGA CCGCAGCAAC
TTCAACTACG GCATGGTCAC TGGCAATGCC GGCGAATACG GCCAATGCAC CACCAAGGTC
GATTTCGTCC AGCGCACCGC CGAACCGCGT GACGAAGTCA AAGGCCTGGT GGCCCGCACC
ACGTTCTACA TGTTCGACCG CTACAAGCTG AACATGTCGC GCCAACAGCA ACAGCTGCTG
ATGGCCTGGG ACAAGCAACA CCCCGTGTCG GCCTGGGAGA AAGAACGCGA CCGGCGCATT
GCCGCGATCA TGGGCCATGC CAACCCGTTC GTAAGCGGCG AACGCAAGTG GACTGCCGGC
TACAAGCCGG TTGGCAGCGG CGTGGTAGAG GCGGTGCCGG TAAACGCAGC CAAGCCAGAG
GCCAAACCAA GCCTGGCCAG CGCCGGTTCG GTCGGCGCCG TGCTTGGCAA CCGCAACAGC
CACGTCTATC ACCTGTCAGT CGGCTGCCCG GGCTACAACC AGGTTACAGC GAAGAACCAG
GTTACCTTCG CAAACGAAGG TGAAGCGCAG GCAGCGGGGT ATCGCAAGGC AGGCAACTGC
CGCTGA
 
Protein sequence
MKSLLYAVTL LFSFTLPALA NPPATFTEAK VVAKQKVYLD QASSAMGDLY CGCKWTWVGK 
SGGRIDAASC GYQTRKQQNR AERTEWEHIV PAHTFGNQRQ CWKNGGREHC VDNDPVFRAM
EADLFNLYPA VGEVNGDRSN FNYGMVTGNA GEYGQCTTKV DFVQRTAEPR DEVKGLVART
TFYMFDRYKL NMSRQQQQLL MAWDKQHPVS AWEKERDRRI AAIMGHANPF VSGERKWTAG
YKPVGSGVVE AVPVNAAKPE AKPSLASAGS VGAVLGNRNS HVYHLSVGCP GYNQVTAKNQ
VTFANEGEAQ AAGYRKAGNC R