Gene PP_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3356 
Symbolfcs 
ID1046999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3794567 
End bp3796336 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content66% 
IMG OID637146774 
Productferuloyl-CoA synthase 
Protein accessionNP_745496 
Protein GI26990071 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTG TCGAGCCACT GGCGCCGCTG CCGGCGCGCC TGCTCGAGCG CCTGGTGCAT 
TGGGCCCAGG TGCGCCCGGA CACCACTTTC ATCGCGGCAC GCCAGGCAGA CGGTGCCTGG
CGTTCGATCA GCTACGTGCA GATGCTCGCC GATGTGCGCA CCATCGCCGC CAACTTGCTA
GGACTGGGCC TCAGTGCCGA GCGCCCGCTG GCGCTGCTTT CCGGCAACGA CATCGAACAC
CTGCAAATCG CCCTCGGCGC CATGTATGCC GGTATTGCCT ATTGCCCGGT GTCGCCGGCC
TACGCGCTGT TGTCGCAAGA CTTCGCCAAG TTGCGCCATG TCTGCGAGGT GCTCACCCCC
GGAGTGGTCT TCGTCAGCGA CAGCCAGCCG TTCCAGCGCG CCTTCGAGGC GGTGCTGGAC
GATTCGGTCG GCGTGATCAG CGTGCGTGGC CAGGTCGCAG GTCGCCCCCA TATAAGCTTC
GACAGCCTGT TGCAACCGGG TGACCTGGCG GCGGCCGATG CGGCTTTCGC CGCCACCGGG
CCGGACACCA TCGCCAAATT CCTCTTCACC TCGGGCTCGA CCAAGCTGCC CAAGGCGGTG
ATCACCACCC AGCGCATGCT GTGCGCCAAT CAGCAGATGC TTCTGCAGAC TTTTCCGACG
TTCGCCGAGG AGCCGCCGGT GCTGGTGGAC TGGCTGCCGT GGAACCACAC GTTCGGCGGT
AGCCACAACC TCGGCATCGT GCTTTACAAC GGGGGCAGTT TCTACCTGGA CGCCGGCAAG
CCGACCCCGC AAGGCTTCGC CGAGACCTTG CGCAATCTGC GCGAGATTTC CCCCACGGCC
TACCTCACCG TACCCAAGGG CTGGGAGGAA CTGGTCAAGG CACTGGAGCA GGACCCCGCG
CTACGCGAGG TGTTCTTTGC CCGCATCAAG CTGTTCTTCT TTGCCGCCGC AGGCCTGTCG
CAAAGCGTCT GGGACCGGCT GGACCGCATT GCCGAGCAAC ACTGTGGCGA ACGCATCCGC
ATGATGGCCG GCCTTGGCAT GACCGAAGCC TCGCCATCGT GCACCTTCAC CACCGGGCCT
TTGTCGATGG CCGGCTATGT CGGGCTGCCG GCACCTGGCT GCGAAGTGAA GCTGGTGCCG
GTGGGCGACA AGCTCGAGGC GCGCTTCCGT GGCCCGCATA TCATGCCGGG CTACTGGCGC
TCGCCGCAGC AGACCGCCGA GGCGTTCGAC GAGGAGGGCT TCTACTGTTC GGGCGACGCG
TTGAAGCTGG CCGATGCCAG GCAGCCCGAG CTTGGCCTGA TGTTCGATGG CCGTATCGCT
GAGGACTTCA AACTTTCGTC CGGGGTATTC GTCAGTGTCG GGCCGCTGCG CAACCGCGCA
GTGCTGGAGG GCTCGCCTTA CGTACAGGAC ATCGTGGTCA CCGCGCCGGA CCGTGAATGC
CTGGGCCTGC TGGTGTTCCC GCGTCTGCCC GAGTGTCGGC GCCTGGCCGG GCTGGCAGAG
GATGCCAGCG ATGCGCGGGT GCTGGCCAAC GACACCGTGC GCAGTTGGTT CGCTGACTGG
CTGGAGCGCT TGAACCGCGA TGCCCAAGGC AACGCCAGCC GTATCGAATG GCTGTCGCTG
CTGGCCGAGC CGCCGTCGAT CGACGCCGGT GAAATCACCG ACAAGGGCTC GATCAATCAG
CGCGCCGTGC TGCAGCGGCG CGCCGCTCAG GTCGAGGCGC TGTACCGTGG CGAAGACCCC
GACGCATTGC ACGCCAAGGT GCGGCCTTGA
 
Protein sequence
MQPVEPLAPL PARLLERLVH WAQVRPDTTF IAARQADGAW RSISYVQMLA DVRTIAANLL 
GLGLSAERPL ALLSGNDIEH LQIALGAMYA GIAYCPVSPA YALLSQDFAK LRHVCEVLTP
GVVFVSDSQP FQRAFEAVLD DSVGVISVRG QVAGRPHISF DSLLQPGDLA AADAAFAATG
PDTIAKFLFT SGSTKLPKAV ITTQRMLCAN QQMLLQTFPT FAEEPPVLVD WLPWNHTFGG
SHNLGIVLYN GGSFYLDAGK PTPQGFAETL RNLREISPTA YLTVPKGWEE LVKALEQDPA
LREVFFARIK LFFFAAAGLS QSVWDRLDRI AEQHCGERIR MMAGLGMTEA SPSCTFTTGP
LSMAGYVGLP APGCEVKLVP VGDKLEARFR GPHIMPGYWR SPQQTAEAFD EEGFYCSGDA
LKLADARQPE LGLMFDGRIA EDFKLSSGVF VSVGPLRNRA VLEGSPYVQD IVVTAPDREC
LGLLVFPRLP ECRRLAGLAE DASDARVLAN DTVRSWFADW LERLNRDAQG NASRIEWLSL
LAEPPSIDAG EITDKGSINQ RAVLQRRAAQ VEALYRGEDP DALHAKVRP