Gene PP_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3355 
Symbol 
ID1046994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3793329 
End bp3794519 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID637146773 
Productbeta-ketothiolase 
Protein accessionNP_745495 
Protein GI26990070 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCA CGCCCTGGGT CGACCTGGGT GGCGCATTGG CCGCGATCTC GCCCATCGAC 
CTGGGCATTC AGGCCGGCCG CGCGGTGCTG GCACGTGCAG CTGCCGCCCC TCAGGCGGTA
GACAGTGTGC TCGCCGGCAG CATGGCTCAG GCCAGCTTCG ACGCCTACAT GCTGCCACGC
CATGTCGGCC TCTACTGTGG CGTGCCGCAG GCGGTACCGG CACTGGCGGT GCAGCGCATC
TGTGGCACGG GCCTTGAACT GTTGCGTCAG GCCGGTGAAC AGCTGCGCAG TGGCGCCCGC
CAGGTGCTGT GCGTGGGCGC GGAGTCGATG TCGCGCAATC CGATCGCGGC CTATGAACAC
CGGGGCGGTT TTCGCCTGGG GGCGCCGGTC GGGTTCAAGG ACTTTCTCTG GGAAGCCCTG
TACGACCCGG CTGCCGGCGT GGACATGATC GGTACTGCGG AAAACCTGGC CCGTGCCTAT
GGCCTGGCGC GTGAAACGGT GGACGCGTGG GCCCTGCGCA GCCATCAGCG GGCCCTGCAA
GCCCAGGTGC AGGGCTGGTT CGACGAGGAA ATCGTCAGCG TCACCGCGCA GGCACTGGAG
GTAGAAGGCT GCCAGCCACG CGGCATTGCA TTGCCGCGTG GCGTGAGTGA GGTCAGCCAG
GACAGCCACC CACGGCCTAC CGACGCGGCC GCACTGGCCC GACTGCGCCC GGTGCACGCC
GGTGGCGTGC AGACGGCTGG CAACAGTTGC GCGGTGGTCG ATGGCGCGGC GGCAGCCTTG
GTCACGCGCT ACTCCGATTG CACTCATCCG CCTTTGGCGC GCTTGCTGAT GGCCACGGCT
GTTGGCGTGC CGCCCGGCCT CATGGGCATC GGGCCGGCGC CGGCCATTAC CTTGCTGCTC
GAGCGCAGCG GCCTGCGCCT GGAGCAGATC GACCGCCTGG AAATCAACGA GGCCCAGGCC
GCCCAAGTGC TGGCGGTGGC CCAGGCGCTC GAACTCGATG TGGACAAGCT CAATGTCCAT
GGCGGCGCTA TCGCCCTTGG TCACCCATTG GCCGCTACAG GTCTGCGCCT GGTCCACACC
TTGGCCCGTC AATTGCGCGA CGGCAACTTG CGCTATGGCA TCGCAGCGGC ATGCATCGGC
GGTGGCCAAG GCATGGCGCT GCTGATCGAA AACCCTCATT TCGTTGCCTG A
 
Protein sequence
MVRTPWVDLG GALAAISPID LGIQAGRAVL ARAAAAPQAV DSVLAGSMAQ ASFDAYMLPR 
HVGLYCGVPQ AVPALAVQRI CGTGLELLRQ AGEQLRSGAR QVLCVGAESM SRNPIAAYEH
RGGFRLGAPV GFKDFLWEAL YDPAAGVDMI GTAENLARAY GLARETVDAW ALRSHQRALQ
AQVQGWFDEE IVSVTAQALE VEGCQPRGIA LPRGVSEVSQ DSHPRPTDAA ALARLRPVHA
GGVQTAGNSC AVVDGAAAAL VTRYSDCTHP PLARLLMATA VGVPPGLMGI GPAPAITLLL
ERSGLRLEQI DRLEINEAQA AQVLAVAQAL ELDVDKLNVH GGAIALGHPL AATGLRLVHT
LARQLRDGNL RYGIAAACIG GGQGMALLIE NPHFVA