Gene PP_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3353 
Symbol 
ID1046997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3790704 
End bp3791579 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID637146771 
Producthypothetical protein 
Protein accessionNP_745493 
Protein GI26990068 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.841057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACG TGCCGGGCGG CGAGTTCAGC TTTGGTTCAA GCCGCTTTTA CGACGAAGAA 
GGCCCGCCTC ACCCCGCCAA GGTGTCCGGC TTCTGGATTG ACGTGCATCC GGTCACCAAC
GCCCAGTTCG CGCGCTTCGT CAAGGCCACG GGGTATGTCA CCCATGCCGA GCGCGGTACC
CGTGTCGAGG ACGACCCTGC CCTGCCCGAC GCGCTGCGGA TACCGGGTGC GATGGTGTTT
CATCAGGGTG CGGACGTGCT CGGCCCCGGC TGGCAGTTCG TGCCCGGCGC CAACTGGCGA
CACCCGCAAG GGCCGGGCAG CAGCCTGGCC GGGCTGGACA ACCATCCGGT GGTGCAGATC
GCCCTGGAAG ATGCCCAGGC CTATGCCCGC TGGGCAGGCC GCGAACTGCC CAGCGAGGCG
CAGCTGGAAT ACGCCATGCG CGGCGGCCTG ACCGATGCCG ACTTCAGCTG GGGTACCACC
GAGCAGCCCA AGGGCAAGCT CATGGCCAAT ACCTGGCAGG GTCAGTTCCC TTATCGCAAT
GCGGCGAAGG ATGGTTTTAC CGGTACATCG CCCGTGGGTT GCTTCCCGGC CAACGGCTTT
GGCCTGTTCG ATGCCGGCGG CAATGTCTGG GAGCTGACTC GCACGGGCTA TCGGCCAGGC
CATGACGCAC AGCGCGACGC CAAGCTCGAC CCCTCAGGCC CGGCCCTGAG TGACAGCTTC
GACCCGGCAG ACCCCGGCGT GCCGGTGGCG GTAATCAAAG GCGGCTCGCA CCTGTGTTCG
GCGGACCGCT GCATGCGCTA CCGCCCCTCG GCACGCCAGC CGCAGCCGGT GTTCATGACG
ACCTCGCACG TGGGTTTCAG AACGATTCGG CAATGA
 
Protein sequence
MVHVPGGEFS FGSSRFYDEE GPPHPAKVSG FWIDVHPVTN AQFARFVKAT GYVTHAERGT 
RVEDDPALPD ALRIPGAMVF HQGADVLGPG WQFVPGANWR HPQGPGSSLA GLDNHPVVQI
ALEDAQAYAR WAGRELPSEA QLEYAMRGGL TDADFSWGTT EQPKGKLMAN TWQGQFPYRN
AAKDGFTGTS PVGCFPANGF GLFDAGGNVW ELTRTGYRPG HDAQRDAKLD PSGPALSDSF
DPADPGVPVA VIKGGSHLCS ADRCMRYRPS ARQPQPVFMT TSHVGFRTIR Q