| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3341 |
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| Symbol | |
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| ID | 1046996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3779043 |
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| End bp | 3779459 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146759 |
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| Product | nickel responsive regulator |
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| Protein accession | NP_745481 |
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| Protein GI | 26990056 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.370359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACGAA TCACCATCAC GCTGGATGAA GAGCTGCTCG ACGTCATCGA TCGGCGGGTG
GCGACCCAAG GCTACCAGGG CCGCTCGGAG GCCATCCGCG ACCTGTTGCG TGCGGGGATG
CGCGAGTCTG AAGCCTTGCC GGACGATGCC GCCTGCGTGG CGGTGGTCAG TTACCTGTAC
GACCACAGCA CCCGCGAACT GCCCAGACGG CTCAACCAGA CCCTGCACGC CCACCACGAT
CTGACCCGAT CCACCCTGCA TGTGCACCTG GATGCCGGCC ACTGCCTGGA GGTCTCGGTG
CTGCAGGGCG AAAGCGGCCG AATTGGCGAG TTGTCTCGCC AATTGATGGT TGAGCGCGGC
GTGGAACATG GCCAGGTGCA GGTGATCCCG GCTCCGGGGC AGCCGAAGGT GCGCTGA
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| Protein sequence | MQRITITLDE ELLDVIDRRV ATQGYQGRSE AIRDLLRAGM RESEALPDDA ACVAVVSYLY
DHSTRELPRR LNQTLHAHHD LTRSTLHVHL DAGHCLEVSV LQGESGRIGE LSRQLMVERG
VEHGQVQVIP APGQPKVR
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