Gene PP_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3322 
SymbolhemB-2 
ID1046969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3757685 
End bp3758686 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID637146743 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionNP_745465 
Protein GI26990040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGCA TGACCTACTT CGCGAGCTCA ACGGGCGCGT TCCCGGCCAC GCGTTTGCGC 
CGTAATCGCG CTGACGAATG GACGCGTCGT CTGGTCGCTG AAAACAGCCT GTCTCGCGAT
GACCTGATCT GGCCGGTTTT TCTCAAGGAA GGCTCAGGTA CACGCGAGGC GATCACCGCC
ATGCCGGGCC AGGTACGCGT CAGCCTGGCC GAACTGCCGG ATCACGTAGG CCGGGCGGTC
GAACTGGGCA TTCCGGCCAT TGCCCTGTTT CCCGCCACTC CAGTGCAGCG CAAAGACAGT
GAGGGCACCC ACGCCCTCGA CGCGGACAAC CTGATCTGCC GCGCCGCCAG GTTGCTCAAG
GCCACGTTCC CCAACCTTGG CTTGATCGGC GACGTCGCAC TGGACCCCTA CACCGACCAT
GGCCACGACG GCGTGCTGCG CCAAGGCCGC GTGGCCAATG ACGAGACCTT GCAGGTACTG
GCGGCCCAGG CTGTGGTCCA GGCCCAGGCC GGCATCGACA CCTTGGCACC TTCGGACATG
ATGGACGGGC GCATCGGCGC GCTCAGGTCC GCGCTGGACC TGGCCGGGTT CAGCGATGTG
CGTCTGATGT CCTACGCCGC CAAGTACGCG TCCGGCTTCT ACGGCCCGTT CCGCGACGCG
CTGGGTTCGG CGGCCGCGCT CAAATGCGAC AAGCGCACGT ACCAGATGGA CCCGGCCAAC
AGCGACGAAG CCCTGCGCGA AGTAGCGCTG GACCTGCAAG AAGGCGCCGA CATGGTGATG
GTCAAGCCCG GCATGCCCTA TCTGGACATC ATTCAAAGGG TCAAGGCAAC CTTTGCCGTG
CCGACATTCG CCTACCAGGT CAGCGGTGAA TACTCGATGC TCAAGGCAGC GATCAATCAT
GGCTGGCTGG ATCCCCGCAC GTTTGAACGC CATCAATGCC TCCAGGATGA GCTGCACGGT
AAATGCGCCG CCTGTACTCG CCGTGATGCA GGCGAGGACT GA
 
Protein sequence
MRGMTYFASS TGAFPATRLR RNRADEWTRR LVAENSLSRD DLIWPVFLKE GSGTREAITA 
MPGQVRVSLA ELPDHVGRAV ELGIPAIALF PATPVQRKDS EGTHALDADN LICRAARLLK
ATFPNLGLIG DVALDPYTDH GHDGVLRQGR VANDETLQVL AAQAVVQAQA GIDTLAPSDM
MDGRIGALRS ALDLAGFSDV RLMSYAAKYA SGFYGPFRDA LGSAAALKCD KRTYQMDPAN
SDEALREVAL DLQEGADMVM VKPGMPYLDI IQRVKATFAV PTFAYQVSGE YSMLKAAINH
GWLDPRTFER HQCLQDELHG KCAACTRRDA GED