Gene PP_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3316 
Symbol 
ID1046962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3751057 
End bp3753879 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content64% 
IMG OID637146737 
Productchaperone-associated ATPase, putative 
Protein accessionNP_745459 
Protein GI26990034 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.39865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGGC AGGCTCCATC TCGTCATCTC AATGACTCAA GGAGCGCCCG CATGGCCAGC 
AAACAATGCC AGGTCTGTGG CCAACCCGCC ACGACACGGG TGGAGGCCAA GGTCAATGGC
CGCCACAGCA TCATGCTGTT GTGTGATGAT CACTACCGCC AATTGGTGCG CCAGCAAAAA
CGCACCCTTT CCCCACTGGA AGCCCTTTTC GGCTCGCGCA GCGGTTTGTT CGAAGAGTTC
ATGGGCAGCG ATTTGCTGCG CATCGGAGAA GACTCGGCAT CCGTTGCCAC GGATGCCGAT
GAAGTGGCTG AAGCGTCGTC TGGGGAACCT GGCCGCGCAG CGTCCGGCAC GCCACGCCGC
CGCAGCAGCG GGCTGGCCAG CCGCATCAGC GAACACTCCG AGGCCCTGTT GCAGGAAGCC
GCCAAGCGTG CCACGGAGTT CGGTCGGTCC GAAGTCGACA CCGAACACCT GCTATTGGCG
CTGGCCGACA GCGACGTGGT GAAGACCATC CTGAGCCAGT TCAAGATCAA GGTTGATGAG
CTCAAGCGCC AGATCGAAGC CGAAGCCAAG CGCGGCGACA AGCCATTTGA AGGCGAAGTC
GGCGTGTCGC CTCGGGTCAA GGATGCGCTC AGTCGCGCCT TCGTCGCCTC CAATGAGTTG
GGGCACGCAT ACGTAGGCCC CGAGCACTTC TTGATCGGGC TGGCCGAAGA GGGCGAAGGG
CTGGCCGCCA ACTTGCTGCG CCGCTATGGC CTTATGCCGC AGGCCCTGCG CCAGTGCGTC
AGCAAGGTGG TTGGCAAGGG TGCAGAGGAT GGTCGCGCCG AGGCACCGAC CGAAACGCCG
GAGCTCGACA AGTACTCGCG CGATCTCACC AGGATGGCGC GCGATGGCAA GCTGGACCCG
GTCATCGGGC GGGCACAGGA AATCGAAACC ACCATTGAGG TACTGGCGCG GCGCAAGAAG
AACAACCCGG TGTTGATCGG CGAGCCTGGC GTGGGCAAGA CGGCCATCGT CGAGGGGCTG
GCGCAGCGCA TGGTGGCCGG CGAGGTGCCC GAGACGCTGC GCGACAAGCG CCTGGTCGAA
CTGAACATCA ATTCGTTGGT GGCTGGCGCG AAGTACCGAG GCGAGTTCGA GGAGCGCGTG
CAGAAGGTGC TGAAGGAAAT CGCCGAGCAT CAGGGCGAGC TGATTCTCTT CATCGACGAA
GTGCACACCA TCGTCGGGGC AGGCCAGGGC GGTGGAGAAG GCGGCTTGGA CGTGGCCAAC
GTCTTCAAGC CGATGATGGC GCGTGGTGAG CTGAACCTGA TTGGCGCGAC GACGCTCAAC
GAGTACCAGA AGTACATCGA GCAGGACGCT GCGCTGGAGC GGCGTTTCCA ACCGGTCGTG
GTGCCCGAGC CAACGGTGGC GCAGACCATC ATGATCCTGC GCGGCCTGCG CGACACCTTC
GAAGCGCACC ACAAGGTCAG CATCACCGAG GAGGCGATCA TCGCTGCCGC CGAACTGTCC
GACCGCTACG TCAGCGCGCG CTTTCTGCCG GACAAGGCCA TCGATCTGCT CGATCAGGCT
GCCGCCCGCG TCAAGTTATC GGCGACGGCG CGTCCGGTTG CGGTGCAGGA AATGGAGTCG
GAGTTGCACC AGTTGCGCCG CGAGCAGGAC TACGCGGCTT CGCGCAAGCA ATATGACAAT
GCGGCGCAGA TCAGCAAGCG CGTCGAAGCC ACGGAGGCCG AACTCAAGCA GCGGGTCGAG
GAGTGGGAGC GCGAGCGCGG CTCGGGCAGC ACCGAGGTCA AGGCGGAACA TGTGGCGCAA
ATCGTCTCGC GGCTAACCGG CATTCCGGTC AATGAACTGA CGGTGGAGGA GCGCGAGAAG
CTGTTGCACC TGGAGCAGCG GCTGCATGAG CGCCTGGTGG GGCAGGACGA GGCGGTGCGT
GCGGTGGCGG ACGCGGTTCG GCTGTCGCGC GCTGGGCTGC GCGAAGGCAG CAAGCCCGTT
GCCACGTTCC TGTTCCTGGG CTCCACCGGT GTCGGCAAGA CCGAGCTGGC CAAGGCGCTG
GCCGAAACCA TCTACGGCGA CGAGAGCGCC CTGTTGCGTA TCGACATGTC AGAGTATGGC
GAGCGCCATT CCGTGGCTCG GCTGGTGGGC GCGCCTCCGG GTTACGTTGG TTATGACGAA
GGCGGCCAGC TTACCGAAAA GGTCCGGCGC AAGCCCTATA GCGTGCTGCT GCTCGACGAA
ATCGAGAAGG CCCACGCCGA CGTCTACAAC ATCCTGCTGC AGGTGTTCGA CGACGGGCGA
CTGACCGATG GCAAGGGGCG CGTGGTGGAC TTCACCAACA CCATTATCAT CGCCACGTCC
AACCTGGGCT CCGACATTAT TCAGCGGCGG CTGAAGGCGC CTGGAGCGGC TGGTGAGGAG
TACGAGAAGA CCAAGGTCGA GGTGATGGAA GTGCTGCGCG GGCACTTTCG CCCCGAGTTC
CTCAACCGAA TCGATGAGAT CATCGTCTTC CATGCGCTGG GCAAGCAGGA GATCCGCCAC
ATTGTTGGCC TGCAACTTGA GCGCGTAGCC CGCAATGCCG CGAGCCAGGG CGTGACGCTG
ACGTTCGACG AGACACTGGT CGATCACTTG GCGCAAGTCG GCTACAAGCC CGAATTCGGT
GCCCGCGAGC TCAAGCGACT GATCCGCAGC GAGCTGGAGA CGGCACTGGC ACGTGAAATG
CTCGGCGGCG GCATTGGCAA GGGTGATCAC GCCCATGTGC GCTGGGACGA CAAGGCGGAG
CGGGTCGGGT TCGACCGCCG GCAAGCCGCG CCGGCCAAAG AGCTCGACAG TGAAAATGCG
TGA
 
Protein sequence
MLRQAPSRHL NDSRSARMAS KQCQVCGQPA TTRVEAKVNG RHSIMLLCDD HYRQLVRQQK 
RTLSPLEALF GSRSGLFEEF MGSDLLRIGE DSASVATDAD EVAEASSGEP GRAASGTPRR
RSSGLASRIS EHSEALLQEA AKRATEFGRS EVDTEHLLLA LADSDVVKTI LSQFKIKVDE
LKRQIEAEAK RGDKPFEGEV GVSPRVKDAL SRAFVASNEL GHAYVGPEHF LIGLAEEGEG
LAANLLRRYG LMPQALRQCV SKVVGKGAED GRAEAPTETP ELDKYSRDLT RMARDGKLDP
VIGRAQEIET TIEVLARRKK NNPVLIGEPG VGKTAIVEGL AQRMVAGEVP ETLRDKRLVE
LNINSLVAGA KYRGEFEERV QKVLKEIAEH QGELILFIDE VHTIVGAGQG GGEGGLDVAN
VFKPMMARGE LNLIGATTLN EYQKYIEQDA ALERRFQPVV VPEPTVAQTI MILRGLRDTF
EAHHKVSITE EAIIAAAELS DRYVSARFLP DKAIDLLDQA AARVKLSATA RPVAVQEMES
ELHQLRREQD YAASRKQYDN AAQISKRVEA TEAELKQRVE EWERERGSGS TEVKAEHVAQ
IVSRLTGIPV NELTVEEREK LLHLEQRLHE RLVGQDEAVR AVADAVRLSR AGLREGSKPV
ATFLFLGSTG VGKTELAKAL AETIYGDESA LLRIDMSEYG ERHSVARLVG APPGYVGYDE
GGQLTEKVRR KPYSVLLLDE IEKAHADVYN ILLQVFDDGR LTDGKGRVVD FTNTIIIATS
NLGSDIIQRR LKAPGAAGEE YEKTKVEVME VLRGHFRPEF LNRIDEIIVF HALGKQEIRH
IVGLQLERVA RNAASQGVTL TFDETLVDHL AQVGYKPEFG ARELKRLIRS ELETALAREM
LGGGIGKGDH AHVRWDDKAE RVGFDRRQAA PAKELDSENA