Gene PP_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3296 
Symbol 
ID1046942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3729464 
End bp3729943 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID637146717 
ProductYeeE/YedE family protein 
Protein accessionNP_745439 
Protein GI26990014 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.553087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACGGT CTTCGTGGTC AGGCATATAC TTTCAGGAGC ATGAAATGAA GCGGATCAGT 
GGCTTTATCG CAGGGTTGCT GTTCGGCATG GGAATATTGC TATCCGGCAT GGCAAACCCC
GCCAAGGTGC TGGGGTTTCT CGACATTGCC GGGCAGTGGG ACCCGTCGCT GGGACTGGTC
ATGGTGGGTG CGATAGGTGC CGCACTGTTG CCGATGACTT GGGCGCGACG TCATACCACG
GCCTTGCTGG GAAGTAAGAT ACAGCTGCCT GCCAGGCGCG ACATCGACCG TCGACTCGTC
GGGGGGAGCC TGGTTTTCGG CATAGGCTGG GGGCTTGCCG GCGTATGTCC GGGGCCGGTG
CTGGTGTTAC TCGCCGGGGG GTACTGGCAA GCCTGGCTAT TCGTGCTCGC GATGCTTGCC
GGTATGGGAG TGTTTAATGT TGCGGAAGCG TTTCGCAGCC GTCATCAGGG CAGGGTTTGA
 
Protein sequence
MPRSSWSGIY FQEHEMKRIS GFIAGLLFGM GILLSGMANP AKVLGFLDIA GQWDPSLGLV 
MVGAIGAALL PMTWARRHTT ALLGSKIQLP ARRDIDRRLV GGSLVFGIGW GLAGVCPGPV
LVLLAGGYWQ AWLFVLAMLA GMGVFNVAEA FRSRHQGRV