| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3286 |
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| Symbol | phaN |
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| ID | 1046936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3720421 |
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| End bp | 3721344 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637146707 |
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| Product | PaaX family transcriptional regulator |
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| Protein accession | NP_745429 |
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| Protein GI | 26990004 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.17765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATC TCGCACCACT GAACCACTTG ATCACCCGCT TTCAGGAGCA GACGCCAATC
CGCGCCAGTT CCCTGATCAT CACGTTGTAC GGCGATGCCA TCGAGCCGCA CGGCGGTACA
GTCTGGCTCG GTAGCCTGAT CAACCTGCTG GAGCCGATCG GCATCAATGA ACGGCTGATA
CGCACGTCGA TCTTTCGCCT GACCAAAGAA GGTTGGCTCA CTGCAGAAAA GGTGGGCCGA
CGCAGTTATT ACAGCCTGAC AGGCACTGGC CGTCGGCGTT TCGAAAAAGC CTTCAAGCGC
GTCTATAGCC CGAGCCAGCC AGCCTGGGAC GGGGCCTGGA CACTGGTGTT GCTGTCGCAA
CTCGAGGCGG GTAAACGCAA GGCCGTGCGT GAGGAGCTAG AGTGGCAGGG GTTTGGTGTC
ATGGCGCCGA ACCTGCTGGG TTGCCCACGG GCAGACCGTG CCGACCTGGT GGCCACGTTG
CATGATCTTG AGGCGGGCGA CGACAGTATC GTCTTCGAAA CCCACACCCA AGAGGTACTC
GCGTCCAAGG CGATGCGCGC CCAGGTGCGG GAAAGCTGGC GTATCGACGA ACTGGGGCAG
CAATACAGCG AGTTTATCCA ACTGTTCAGG CCGCTGTGGC AAGGTTTGAA AGAGCAGCCG
TTGCTGGATG CCCAAGATTG CTTCCTTGCG CGCACGCTGC TGATTCACGA GTACCGCCGC
CTGCTGCTGC GCGACCCGCA ACTACCCGAC GAGCTGCTGC CAGGGGACTG GGAGGGAAGG
GCTGCGCGAC AGTTGTGCCG TAACCTCTAC CGACTGGTGT TTGCCAAAGC CGAAGAATGG
TTGAATGCAG CGCTGGAAAC AGCAGATGGC CCATTGCCGG ACGTGAGCGA GAGTTTTTAC
AAGCGTTTTG GCGGGTTGGC TTGA
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| Protein sequence | MSNLAPLNHL ITRFQEQTPI RASSLIITLY GDAIEPHGGT VWLGSLINLL EPIGINERLI
RTSIFRLTKE GWLTAEKVGR RSYYSLTGTG RRRFEKAFKR VYSPSQPAWD GAWTLVLLSQ
LEAGKRKAVR EELEWQGFGV MAPNLLGCPR ADRADLVATL HDLEAGDDSI VFETHTQEVL
ASKAMRAQVR ESWRIDELGQ QYSEFIQLFR PLWQGLKEQP LLDAQDCFLA RTLLIHEYRR
LLLRDPQLPD ELLPGDWEGR AARQLCRNLY RLVFAKAEEW LNAALETADG PLPDVSESFY
KRFGGLA
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