Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3256 |
Symbol | |
ID | 1046904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3690560 |
End bp | 3691219 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146677 |
Product | glycosyl transferase, group 2 family protein |
Protein accession | NP_745399 |
Protein GI | 26989974 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0789044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCCG TTGTCATCCC TGCACATAAC GAAGCCCGCC GCCTTGGGCG ATGCCTGCGG GCGGTGCTGG TGGCTGCCCG GCAGGCGCAG CAAGCGGGAC TGCACGTGGA AGTGCTGGTG GTACTGGACC GCTGCAGCGA CGGCAGCGCC GCCGTGGCGC GGCGTTTCGG TGTACACACG CTGGAGGTGG ATGCCGGTAA TGTCGGCATG GCACGTCGTG TGGGGGCCGC GCACATGGTC GAGCGTGGCG CCACATGGCT GGCGTGCACC GATGCGGACA GCCGGGTCCC GGCGCACTGG CTGCTGTCGC AGCTGGCCTG TAGCGCCGAG GTGGTTTGCG GCACCGTGCA TGTCGAGTAC TGGCAACCCT GGCAGACAGC CGCGCTGCGC AAGCTGTACC AGAGCCGCTA CCAGGCGTGT GAAGGGCATC GGCATGTGCA CGGCGCAAAC CTGGGGGTTT GTGCCGATGC CTATGAGCGT GTGGGTGGCT TTCAGCCCCT CGCGGCGCAT GAAGATGTGC AGCTGGTCAG CGACCTACAG GCCAGCGGCG CCCAGATCGT CTGGACCGCC AGGCATAGTG TGGCCACCAG CAGTCGACGT GACAGCCGCG CCCGCGAGGG GTTTGGTGAT TACCTGGCTG GGTTGCAGGC GCAGTCTTGA
|
Protein sequence | MIAVVIPAHN EARRLGRCLR AVLVAARQAQ QAGLHVEVLV VLDRCSDGSA AVARRFGVHT LEVDAGNVGM ARRVGAAHMV ERGATWLACT DADSRVPAHW LLSQLACSAE VVCGTVHVEY WQPWQTAALR KLYQSRYQAC EGHRHVHGAN LGVCADAYER VGGFQPLAAH EDVQLVSDLQ ASGAQIVWTA RHSVATSSRR DSRAREGFGD YLAGLQAQS
|
| |