Gene PP_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3255 
Symbol 
ID1046903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3689717 
End bp3690538 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID637146676 
Producthypothetical protein 
Protein accessionNP_745398 
Protein GI26989973 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0605236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGGG CAATCTGGAA AGGCGCCATC AGTTTTGGCC TTGTGCACAT CCCCGTGGCA 
CTCAATACCG CCGTGCGCAC CGAGCGCGTG GACTTCGACT GGCTGGACAA GCGCAGCATG
GAGCCGGTCG GCTACAAGCG GGTGAACAAG GTGACCGGCA AGGAAATCGA CAAGGACAAT
ATCGTCAAGG GCGTAGAGTT CGAGAAGGGC CGCTATGTGG TGATCAGTGA GGAGGAAATC
CGCAAGGCCC GGCCCGAAAC GACCCAGACG ATCGACATCT TTTCCTTTGT GGAAGCGGGC
GATATTCCGC TGCAGCATTT CGATACGCCG TACTACCTGA CCCCGGACCG CCGTGGCGGC
AAGGTGTATG CCTTGCTGCG CGAGACGCTG GAAAAGACCG GCAAGGTGGC ACTGGCCACC
GTGGTATTGC ATACCCGGCA GCACTTGGCG CTGCTGCGGC CTCTGGACCA TGCGCTGGTG
ATGATCACCT TGCGCTGGCC TGAAGAGGTG CGCGGGCTGG AAACGCTGGA GCTGGATGCC
AGCGTGACCG ACAGCAAGGT GGAGAAGCGT GAGCTGGAGA TGGCCAAGCG CCTGGTAGAG
GACATGAGCG GGCCCTGGAA GCCTGAGGAT TATCATGACG CCTTCCGCCA GACGATCATG
GACCTGGTGG AAGAGAAGGC CAGCAAGGGC AAGATCGAGG CGGTGGAGAA GGGCGACACA
GGGGCGGCCG AGAAAGGTGC GGACATCCTC GACCTGACCG AACTGCTCAA GCGCAGCCTG
GGTGGCAAGA AACCGGTGAA GAAGACGCGA AAGGCTTCAT GA
 
Protein sequence
MARAIWKGAI SFGLVHIPVA LNTAVRTERV DFDWLDKRSM EPVGYKRVNK VTGKEIDKDN 
IVKGVEFEKG RYVVISEEEI RKARPETTQT IDIFSFVEAG DIPLQHFDTP YYLTPDRRGG
KVYALLRETL EKTGKVALAT VVLHTRQHLA LLRPLDHALV MITLRWPEEV RGLETLELDA
SVTDSKVEKR ELEMAKRLVE DMSGPWKPED YHDAFRQTIM DLVEEKASKG KIEAVEKGDT
GAAEKGADIL DLTELLKRSL GGKKPVKKTR KAS