Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3255 |
Symbol | |
ID | 1046903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3689717 |
End bp | 3690538 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146676 |
Product | hypothetical protein |
Protein accession | NP_745398 |
Protein GI | 26989973 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0605236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCGGG CAATCTGGAA AGGCGCCATC AGTTTTGGCC TTGTGCACAT CCCCGTGGCA CTCAATACCG CCGTGCGCAC CGAGCGCGTG GACTTCGACT GGCTGGACAA GCGCAGCATG GAGCCGGTCG GCTACAAGCG GGTGAACAAG GTGACCGGCA AGGAAATCGA CAAGGACAAT ATCGTCAAGG GCGTAGAGTT CGAGAAGGGC CGCTATGTGG TGATCAGTGA GGAGGAAATC CGCAAGGCCC GGCCCGAAAC GACCCAGACG ATCGACATCT TTTCCTTTGT GGAAGCGGGC GATATTCCGC TGCAGCATTT CGATACGCCG TACTACCTGA CCCCGGACCG CCGTGGCGGC AAGGTGTATG CCTTGCTGCG CGAGACGCTG GAAAAGACCG GCAAGGTGGC ACTGGCCACC GTGGTATTGC ATACCCGGCA GCACTTGGCG CTGCTGCGGC CTCTGGACCA TGCGCTGGTG ATGATCACCT TGCGCTGGCC TGAAGAGGTG CGCGGGCTGG AAACGCTGGA GCTGGATGCC AGCGTGACCG ACAGCAAGGT GGAGAAGCGT GAGCTGGAGA TGGCCAAGCG CCTGGTAGAG GACATGAGCG GGCCCTGGAA GCCTGAGGAT TATCATGACG CCTTCCGCCA GACGATCATG GACCTGGTGG AAGAGAAGGC CAGCAAGGGC AAGATCGAGG CGGTGGAGAA GGGCGACACA GGGGCGGCCG AGAAAGGTGC GGACATCCTC GACCTGACCG AACTGCTCAA GCGCAGCCTG GGTGGCAAGA AACCGGTGAA GAAGACGCGA AAGGCTTCAT GA
|
Protein sequence | MARAIWKGAI SFGLVHIPVA LNTAVRTERV DFDWLDKRSM EPVGYKRVNK VTGKEIDKDN IVKGVEFEKG RYVVISEEEI RKARPETTQT IDIFSFVEAG DIPLQHFDTP YYLTPDRRGG KVYALLRETL EKTGKVALAT VVLHTRQHLA LLRPLDHALV MITLRWPEEV RGLETLELDA SVTDSKVEKR ELEMAKRLVE DMSGPWKPED YHDAFRQTIM DLVEEKASKG KIEAVEKGDT GAAEKGADIL DLTELLKRSL GGKKPVKKTR KAS
|
| |