| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3254 |
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| Symbol | |
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| ID | 1046902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3688978 |
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| End bp | 3689631 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637146675 |
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| Product | nucleosidase, putative |
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| Protein accession | NP_745397 |
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| Protein GI | 26989972 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0367638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCATTTAG CCCGGGTTGA CCGACAATGG CCGCGCCCTT TGCAGCCACT CGGAAACACC
TGCTCCATGA TGCTTATCAA GCAATTCCCC GACATTTCCC TGAATGACAC GCTGTTCGTC
TTTGCGCTTG AGGCCGAGGC TGGCGATGTC TTTACCGAGG TGAACACCGT GTTCACCGGC
ATTGGCAAGG TCAATGCCGC AATCGCCCTG ACCAAGGCGA TCGCCACGCG CAGGCCCAAG
CTTATCGTCA ACCTGGGCTC GGCTGGCAGC CAGCGTCATG GCAAGGGCGA AGTCGTGTGC
TGTAACCGCT TCGTACAACG CGACATGGAT GTGACCGCGC TGGGCTTTGC CCGTTATGAA
ACACCCTTGT CCGACACCCC GGTGGTACTC GAACACGGGG CGGCAATACC CGGCCTGGCT
GTGGAAACCT GTGGCAGCGG TGACAGCTTC GAGATCAACC ATGGCGACGC GCCTTACGAC
GTGGTCGACA TGGAAGCCTA CGTGCTGGCA TTGATCGCGC GGGGTGAAGG TATCCCGTTC
GTGTGCCTTA AATACATTTC CGATGATGCC GGCAGCGAAG CCGCGGGGGA TTGGGCGGTA
CAAGTGCACC TGGCGGCCGA AGCGTTCAAG CGGGTGCTGT TCAGCCAGGC GTGA
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| Protein sequence | MHLARVDRQW PRPLQPLGNT CSMMLIKQFP DISLNDTLFV FALEAEAGDV FTEVNTVFTG
IGKVNAAIAL TKAIATRRPK LIVNLGSAGS QRHGKGEVVC CNRFVQRDMD VTALGFARYE
TPLSDTPVVL EHGAAIPGLA VETCGSGDSF EINHGDAPYD VVDMEAYVLA LIARGEGIPF
VCLKYISDDA GSEAAGDWAV QVHLAAEAFK RVLFSQA
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