| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3225 |
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| Symbol | |
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| ID | 1046874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3660747 |
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| End bp | 3661691 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637146646 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | NP_745368 |
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| Protein GI | 26989943 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACT CGATCATCGC CAGCCAGCTC GACGACCAGG CCAACCAGCA CCTGCGCGAA
CACTTGCCAG GCCATGAAGT CATTGATATC GCACCCGACC AGCTGGCTGT CGAAGCCCCC
GCCGATGTGT TAATCCTGCG CCCGATCAAT GTGCGTGGGC GACGCGTAGG CACCCCGCCA
CCCGGGTGGC CCTGGGGCCT GAAGTGGGTG CAACTGGTGT CTTCGGGCAT CGACTTCTAC
CCCGACTGGG TGTTCCAGGG GGCGACGGTA ACCAGCGGCA AAGGCGCCAA CGCCGAACAA
GTGGCCGAGT TTGCCCTGGC TTTGGTGTTC GCCGCCGCCA AGCAACTGCC CGGTCTATGG
GTCAAGGACG CCGACTGGCG CCTGACCCCG CTGGCCCCGT TGCGTGGTCG CACCCTGGGC
ATCCTCGGCT TCGGCAGTAT CGGCCAGAGC CTGGCGCGCA AGGCCGTGGC CCTGGGGCTT
CGGGTTCTGG CCCTGAGCCG CCCCGGCCAG GGCATCGCAG ACATCCCTGG CGTAGAACCT
GTGGCCGACC TGCGACAGCT GTTCGCCGGC AGCGACCATC TGGTGCTGGC CGCCCCGCTC
ACTGCGGCCA CCCGTGGCCT GATCGACCGC CAGGTCCTGG CCTATGCCCG CCCCGGCCTG
CACCTGATCA ACATTGCCCG CGGCGGCTTG CTCGACCAAC AGGCCCTGCT CGACGCCCTG
GACAGCGGCT TGATCGGCCG GGCCAGCCTG GATGTCACCG AACCCGAGCC ACTGCCGGCA
GGCCACCCGT TGTACCACCA CCCACGGGTG TTCCTGTCAC CGCACACCTC GGCCATTTCC
GAGGACGGTT ACCCGGCCTT TCTCGATGCC TTCATCGCCA ACTTCCACCG CTACCGCGAG
CAGGCGCCCC TGGCCAACCT GGTCGACACG GCGCGCGGCT ATTGA
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| Protein sequence | MNHSIIASQL DDQANQHLRE HLPGHEVIDI APDQLAVEAP ADVLILRPIN VRGRRVGTPP
PGWPWGLKWV QLVSSGIDFY PDWVFQGATV TSGKGANAEQ VAEFALALVF AAAKQLPGLW
VKDADWRLTP LAPLRGRTLG ILGFGSIGQS LARKAVALGL RVLALSRPGQ GIADIPGVEP
VADLRQLFAG SDHLVLAAPL TAATRGLIDR QVLAYARPGL HLINIARGGL LDQQALLDAL
DSGLIGRASL DVTEPEPLPA GHPLYHHPRV FLSPHTSAIS EDGYPAFLDA FIANFHRYRE
QAPLANLVDT ARGY
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