Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3220 |
Symbol | |
ID | 1046868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3654770 |
End bp | 3656389 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146641 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_745363 |
Protein GI | 26989938 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.94364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGT CACCCCTGAT CGAGGTCCGC GACCTAAGCG TCAGCTACAG CTTCGCCGGG CAACGCAGCC AGGCCCTGCG CCAGCTGTCG TTCAGCCTGG TCCAGGGCGA GACCCTGGCG GTGGTGGGCG AGTCAGGCTC GGGCAAATCG ACCCTGGCCA ACGCCCTGCT TGGTCTGTTG CCGGGCAATG CACGCATCGA CCAAGGCCAG TTATGGGTCG ATGGTGTCGA TATGGCGCAA GCCAGCGAAC GCGCCAGGCG CCAGTTGCGC GGGCGCACCA TCGGCCTGGT GCCGCAAGAC CCAATGGTCA GCCTCAACCC CACCCAACGG ATCGGCCAGC AAATCGCCGA GGCGCTGCAG CTGGCGCGTG GACGACGCTA TCCAGGCCAA GAGGCCAAGG TGCTGGCGCT GCTGGACCAG GTCGGCCTCG ACGAGCCGGC GCTGCGTGCG CGGCAGTACC CCCATGAGCT GTCCGGCGGC ATGCGCCAGC GGGTGCTGAT TGCCATCGCC CTGGCCGGCG AGCCACGGTT GATCATCGCC GACGAGCCCA CCAGTGCGCT GGACGTGACT GTGCAGCGGC GTATTCTCGA TCACCTGCAA CTGCTGGTCG CCGAGCGCGG CATCTCGCTG CTGATCATCA CCCATGATCT GGGCATGGCC TGTGACCGCG CCGACCGCCT GCTGGTGATG AAGCAGGGTG AGCAGGTCGA ACACGGCTCG CCCCGGCAGA TCCTCTGGGG CGCCCGGCAA CCCTACACCC GCGCCCTGCT CGATGCCGCG CCGGCCTTCG TGCCACGGCG CAGGCCAGCC GCACCGCGGG GCCAGACGCC ACTGCTGCGC CTGAGCCATG TCGGCAAACG GTTCGAGCTG CCCGGCAAAA ACGAGCATTA CACTGCCCTG CACGACCTGA GCCTTGAACT GCATGCCGGG CAGACCCTGG CGATTGTCGG CGAATCCGGC TCGGGCAAGA GCACCGCCCT GCGCATCGCC CTGGGCCTGG AGAAGCCCAG TCAAGGGCAG GTGGTGTTCG CCGGCGAGGA CGTCACCGGT TACACCTGGA GCCAGTTCCG CCCCTTGCGC CGGCGTATCC AGCTGGTGCA GCAAAACCCG TTCGCCGCGC TCGACCCGCG CTTCACCGTG TTCGACAGCG TCGTCGAGCC GCTGGTCTCT TTCGGCCTGC TCCGGGGCGA GGCACTAGAG CGCAAGGCCC GCGAGCTGAT CACACGGGTG CAATTGCCAG TGCAGTTCCT CGATCGCCTG CCCAGGGAAT TGTCAGGTGG CCAGCGCCAA CGCGTGGCGA TTGCACGGGC GTTGGCACTG GAGCCAGAGG TGCTGCTGCT CGATGAGCCA GTCAGTGCAC TGGACGTGTC TGTGCAGGCG CAGATCCTCG CCCTGCTGGA CGAATTGCAG CGCGAGCTCG GCATGGCCTA TGTGCTGGTC TCCCATGACC TGGCGGTGGT GGCGAGCATG GCAGACCAGG TGCTGGTGCT ACGGCGCGGG CAGGTGGTCG AGCAAGGGCC GGCGCTGCAG GTGCTCAGCA AGTCGGCCAG CGCCTACACA CGGGCGCTGA TCGACGCGAT ACCAGGGCAT TCACGCAGCA TGTTGCCCGT GGCGATTTAA
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Protein sequence | MSQSPLIEVR DLSVSYSFAG QRSQALRQLS FSLVQGETLA VVGESGSGKS TLANALLGLL PGNARIDQGQ LWVDGVDMAQ ASERARRQLR GRTIGLVPQD PMVSLNPTQR IGQQIAEALQ LARGRRYPGQ EAKVLALLDQ VGLDEPALRA RQYPHELSGG MRQRVLIAIA LAGEPRLIIA DEPTSALDVT VQRRILDHLQ LLVAERGISL LIITHDLGMA CDRADRLLVM KQGEQVEHGS PRQILWGARQ PYTRALLDAA PAFVPRRRPA APRGQTPLLR LSHVGKRFEL PGKNEHYTAL HDLSLELHAG QTLAIVGESG SGKSTALRIA LGLEKPSQGQ VVFAGEDVTG YTWSQFRPLR RRIQLVQQNP FAALDPRFTV FDSVVEPLVS FGLLRGEALE RKARELITRV QLPVQFLDRL PRELSGGQRQ RVAIARALAL EPEVLLLDEP VSALDVSVQA QILALLDELQ RELGMAYVLV SHDLAVVASM ADQVLVLRRG QVVEQGPALQ VLSKSASAYT RALIDAIPGH SRSMLPVAI
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