Gene PP_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3220 
Symbol 
ID1046868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3654770 
End bp3656389 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content67% 
IMG OID637146641 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_745363 
Protein GI26989938 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.94364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT CACCCCTGAT CGAGGTCCGC GACCTAAGCG TCAGCTACAG CTTCGCCGGG 
CAACGCAGCC AGGCCCTGCG CCAGCTGTCG TTCAGCCTGG TCCAGGGCGA GACCCTGGCG
GTGGTGGGCG AGTCAGGCTC GGGCAAATCG ACCCTGGCCA ACGCCCTGCT TGGTCTGTTG
CCGGGCAATG CACGCATCGA CCAAGGCCAG TTATGGGTCG ATGGTGTCGA TATGGCGCAA
GCCAGCGAAC GCGCCAGGCG CCAGTTGCGC GGGCGCACCA TCGGCCTGGT GCCGCAAGAC
CCAATGGTCA GCCTCAACCC CACCCAACGG ATCGGCCAGC AAATCGCCGA GGCGCTGCAG
CTGGCGCGTG GACGACGCTA TCCAGGCCAA GAGGCCAAGG TGCTGGCGCT GCTGGACCAG
GTCGGCCTCG ACGAGCCGGC GCTGCGTGCG CGGCAGTACC CCCATGAGCT GTCCGGCGGC
ATGCGCCAGC GGGTGCTGAT TGCCATCGCC CTGGCCGGCG AGCCACGGTT GATCATCGCC
GACGAGCCCA CCAGTGCGCT GGACGTGACT GTGCAGCGGC GTATTCTCGA TCACCTGCAA
CTGCTGGTCG CCGAGCGCGG CATCTCGCTG CTGATCATCA CCCATGATCT GGGCATGGCC
TGTGACCGCG CCGACCGCCT GCTGGTGATG AAGCAGGGTG AGCAGGTCGA ACACGGCTCG
CCCCGGCAGA TCCTCTGGGG CGCCCGGCAA CCCTACACCC GCGCCCTGCT CGATGCCGCG
CCGGCCTTCG TGCCACGGCG CAGGCCAGCC GCACCGCGGG GCCAGACGCC ACTGCTGCGC
CTGAGCCATG TCGGCAAACG GTTCGAGCTG CCCGGCAAAA ACGAGCATTA CACTGCCCTG
CACGACCTGA GCCTTGAACT GCATGCCGGG CAGACCCTGG CGATTGTCGG CGAATCCGGC
TCGGGCAAGA GCACCGCCCT GCGCATCGCC CTGGGCCTGG AGAAGCCCAG TCAAGGGCAG
GTGGTGTTCG CCGGCGAGGA CGTCACCGGT TACACCTGGA GCCAGTTCCG CCCCTTGCGC
CGGCGTATCC AGCTGGTGCA GCAAAACCCG TTCGCCGCGC TCGACCCGCG CTTCACCGTG
TTCGACAGCG TCGTCGAGCC GCTGGTCTCT TTCGGCCTGC TCCGGGGCGA GGCACTAGAG
CGCAAGGCCC GCGAGCTGAT CACACGGGTG CAATTGCCAG TGCAGTTCCT CGATCGCCTG
CCCAGGGAAT TGTCAGGTGG CCAGCGCCAA CGCGTGGCGA TTGCACGGGC GTTGGCACTG
GAGCCAGAGG TGCTGCTGCT CGATGAGCCA GTCAGTGCAC TGGACGTGTC TGTGCAGGCG
CAGATCCTCG CCCTGCTGGA CGAATTGCAG CGCGAGCTCG GCATGGCCTA TGTGCTGGTC
TCCCATGACC TGGCGGTGGT GGCGAGCATG GCAGACCAGG TGCTGGTGCT ACGGCGCGGG
CAGGTGGTCG AGCAAGGGCC GGCGCTGCAG GTGCTCAGCA AGTCGGCCAG CGCCTACACA
CGGGCGCTGA TCGACGCGAT ACCAGGGCAT TCACGCAGCA TGTTGCCCGT GGCGATTTAA
 
Protein sequence
MSQSPLIEVR DLSVSYSFAG QRSQALRQLS FSLVQGETLA VVGESGSGKS TLANALLGLL 
PGNARIDQGQ LWVDGVDMAQ ASERARRQLR GRTIGLVPQD PMVSLNPTQR IGQQIAEALQ
LARGRRYPGQ EAKVLALLDQ VGLDEPALRA RQYPHELSGG MRQRVLIAIA LAGEPRLIIA
DEPTSALDVT VQRRILDHLQ LLVAERGISL LIITHDLGMA CDRADRLLVM KQGEQVEHGS
PRQILWGARQ PYTRALLDAA PAFVPRRRPA APRGQTPLLR LSHVGKRFEL PGKNEHYTAL
HDLSLELHAG QTLAIVGESG SGKSTALRIA LGLEKPSQGQ VVFAGEDVTG YTWSQFRPLR
RRIQLVQQNP FAALDPRFTV FDSVVEPLVS FGLLRGEALE RKARELITRV QLPVQFLDRL
PRELSGGQRQ RVAIARALAL EPEVLLLDEP VSALDVSVQA QILALLDELQ RELGMAYVLV
SHDLAVVASM ADQVLVLRRG QVVEQGPALQ VLSKSASAYT RALIDAIPGH SRSMLPVAI