Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3177 |
Symbol | |
ID | 1046827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3601281 |
End bp | 3602450 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146599 |
Product | CdaR transcriptional regulator |
Protein accession | NP_745321 |
Protein GI | 26989896 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTTGC ACAGCGCTTG GCCCAGGCTG CTGTGCCCGA GCCCAAAAGC CAAACACCTA AAGGACCCCG CAATGTTCGA ACTCGACCAT GACCTGGCGC AGGATATCGT TGACCGGGCA ATGGCCATCT TGCCTTGCAA CGTCAATGTC ATGGACAGCC AGGGGTTGAT CCTGGGCAGC GGTGAGCCGG AGCGTATCAA CACCCGTCAC GAGGGCGCGC AGCTGGTCTT GGCCAATGGC CGGATCGTCG AACTGGATAC CGACGCGGCC AAGTGCCTGA AGGGCGTGCA GCCCGGCGTG AACCTGCCAT TGATGCTCGA TGGGCGGCTG ATGGGCGTGT TGGGCCTGAC TGGCGACCCG CAGCAGGTGC GCACCTATGG CGAGCTGGTG CGCATGACCG CCGAAATGCT GCTGGCCCAA CGCAATTTAC AGGCTGACCA GCAATGGCGA AGGCAGCGCT GTGACGACCT GCTGGCGCTA CTGCTCGGCG GCAGCGGTAA CTCGCCGCGC TTGCTGGACG AAGCCCGTCA GTTGGGCCTG AAACCTCAGC TACCGCGGAT ACCGTGCCTG TTCGAGATTA CTTCCGGGCC ACCTGCCGAG GCGCTGGCCG CATGGTTGAT GAGCCGTTAT CCGGATAGCT GGTGCGTCAG CCCGGCTCGC CAGTCGTTGC TGTGGTGCCG CCCGGCAGGC GTGGCACTGG ATGAACTGCG CCTGCTGGAA CGCCTGCAAC GCCACGGCTG GGACATTGAG CGACTGGCCC TTGGTAGTGC AGCGCAGAGC CTGGAGCAGT TACGCCGTGG TTACCGCCGG GTGCGTGACT TGCTGGCCTA CGGCCGTGAG GTATTGCCCA GCGAACGATT GCTCAGCCTG CAGCGATACC GGCTGCCGGC GCTGCTGTGG CGCCACCGTA ACGACGACGC GCTGGACGAG CTGCTGGAGC CGTTGCAGCG CATCCGCGCC AAGGACAGCA GTGGCCAGTT ACTCGCTACC CTGCGCGCCT GGTGTGCCCA TGACGGCCAG AGCCAGTCCT GTGCCGATGC CCTGGGCATC CACCGCAACA GCCTGCGCTA TCGACTGGAG CGCATAGCCG AGCTGGGTGA GGTCGACCCG CTGCGCCTGG AAGGGATGCT CAGCTTGTAT CTGGGGTTGC AGCTGTTGCC AACTGACTGA
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Protein sequence | MLLHSAWPRL LCPSPKAKHL KDPAMFELDH DLAQDIVDRA MAILPCNVNV MDSQGLILGS GEPERINTRH EGAQLVLANG RIVELDTDAA KCLKGVQPGV NLPLMLDGRL MGVLGLTGDP QQVRTYGELV RMTAEMLLAQ RNLQADQQWR RQRCDDLLAL LLGGSGNSPR LLDEARQLGL KPQLPRIPCL FEITSGPPAE ALAAWLMSRY PDSWCVSPAR QSLLWCRPAG VALDELRLLE RLQRHGWDIE RLALGSAAQS LEQLRRGYRR VRDLLAYGRE VLPSERLLSL QRYRLPALLW RHRNDDALDE LLEPLQRIRA KDSSGQLLAT LRAWCAHDGQ SQSCADALGI HRNSLRYRLE RIAELGEVDP LRLEGMLSLY LGLQLLPTD
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