| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3177 |
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| Symbol | |
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| ID | 1046827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3601281 |
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| End bp | 3602450 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637146599 |
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| Product | CdaR transcriptional regulator |
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| Protein accession | NP_745321 |
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| Protein GI | 26989896 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTTGC ACAGCGCTTG GCCCAGGCTG CTGTGCCCGA GCCCAAAAGC CAAACACCTA
AAGGACCCCG CAATGTTCGA ACTCGACCAT GACCTGGCGC AGGATATCGT TGACCGGGCA
ATGGCCATCT TGCCTTGCAA CGTCAATGTC ATGGACAGCC AGGGGTTGAT CCTGGGCAGC
GGTGAGCCGG AGCGTATCAA CACCCGTCAC GAGGGCGCGC AGCTGGTCTT GGCCAATGGC
CGGATCGTCG AACTGGATAC CGACGCGGCC AAGTGCCTGA AGGGCGTGCA GCCCGGCGTG
AACCTGCCAT TGATGCTCGA TGGGCGGCTG ATGGGCGTGT TGGGCCTGAC TGGCGACCCG
CAGCAGGTGC GCACCTATGG CGAGCTGGTG CGCATGACCG CCGAAATGCT GCTGGCCCAA
CGCAATTTAC AGGCTGACCA GCAATGGCGA AGGCAGCGCT GTGACGACCT GCTGGCGCTA
CTGCTCGGCG GCAGCGGTAA CTCGCCGCGC TTGCTGGACG AAGCCCGTCA GTTGGGCCTG
AAACCTCAGC TACCGCGGAT ACCGTGCCTG TTCGAGATTA CTTCCGGGCC ACCTGCCGAG
GCGCTGGCCG CATGGTTGAT GAGCCGTTAT CCGGATAGCT GGTGCGTCAG CCCGGCTCGC
CAGTCGTTGC TGTGGTGCCG CCCGGCAGGC GTGGCACTGG ATGAACTGCG CCTGCTGGAA
CGCCTGCAAC GCCACGGCTG GGACATTGAG CGACTGGCCC TTGGTAGTGC AGCGCAGAGC
CTGGAGCAGT TACGCCGTGG TTACCGCCGG GTGCGTGACT TGCTGGCCTA CGGCCGTGAG
GTATTGCCCA GCGAACGATT GCTCAGCCTG CAGCGATACC GGCTGCCGGC GCTGCTGTGG
CGCCACCGTA ACGACGACGC GCTGGACGAG CTGCTGGAGC CGTTGCAGCG CATCCGCGCC
AAGGACAGCA GTGGCCAGTT ACTCGCTACC CTGCGCGCCT GGTGTGCCCA TGACGGCCAG
AGCCAGTCCT GTGCCGATGC CCTGGGCATC CACCGCAACA GCCTGCGCTA TCGACTGGAG
CGCATAGCCG AGCTGGGTGA GGTCGACCCG CTGCGCCTGG AAGGGATGCT CAGCTTGTAT
CTGGGGTTGC AGCTGTTGCC AACTGACTGA
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| Protein sequence | MLLHSAWPRL LCPSPKAKHL KDPAMFELDH DLAQDIVDRA MAILPCNVNV MDSQGLILGS
GEPERINTRH EGAQLVLANG RIVELDTDAA KCLKGVQPGV NLPLMLDGRL MGVLGLTGDP
QQVRTYGELV RMTAEMLLAQ RNLQADQQWR RQRCDDLLAL LLGGSGNSPR LLDEARQLGL
KPQLPRIPCL FEITSGPPAE ALAAWLMSRY PDSWCVSPAR QSLLWCRPAG VALDELRLLE
RLQRHGWDIE RLALGSAAQS LEQLRRGYRR VRDLLAYGRE VLPSERLLSL QRYRLPALLW
RHRNDDALDE LLEPLQRIRA KDSSGQLLAT LRAWCAHDGQ SQSCADALGI HRNSLRYRLE
RIAELGEVDP LRLEGMLSLY LGLQLLPTD
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