| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3166 |
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| Symbol | |
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| ID | 1046812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3587162 |
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| End bp | 3588076 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146588 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | NP_745310 |
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| Protein GI | 26989885 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.796964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.601701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA ACATTTCCCA TACTGCCGAG GTACAGCAGT TCTTCGAGCA GGCCGCAGGC
TTTTGTAATG CGGCCGGCAA CCCACGCCTC AAACGCATCG TGCAGCGCCT GCTGCAGGAT
ACCGCGCGGC TGATCGAAGA CCTGGACATC AGCGAAGACG AGTTCTGGCA CGCCGTCGAT
TACCTCAACC GCCTGGGCGG TCGCGGCGAA GCCGGGTTGC TGGTGGCGGG GCTGGGCATC
GAACACTTCC TCGACCTGCT GCAGGATGCC AAGGACCAGG AGGCAGGGCG CGTTGGCGGC
ACCCCACGCA CCATCGAAGG CCCGTTGTAC GTGGCTGGCG CACCGATTGC CCAAGGTGAA
GTGCGCATGG ACGACGGCAG CGAGGAGGGC GTGGCCACGG TGATGTTCCT GGAAGGCCAG
GTGCTGGACC CGCACGGACG CCCGCTGCCG GGTGCCACGG TCGACCTGTG GCATGCCAAT
ACCCGTGGTA CCTACTCGTT CTTCGACCAA AGCCAGTCGG CGTACAACCT GCGTCGGCGC
ATCGTTACCG ATGCCCAGGG GCGCTACCGC GCGCGCTCCA TCGTGCCATC GGGCTATGGC
TGCGACCCGC AGGGGCCAAC CCAGGAATGC CTGGACCTGC TGGGCCGTCA TGGCCAGCGC
CCGGCGCACG TGCACTTCTT TATCTCGGCC CCAGGGTACC GGCACCTGAC CACGCAGATA
AACCTGTCGG GGGACAAGTA CCTGTGGGAT GACTTTGCCT ATGCCACACG GGATGGGCTG
GTCGGGGAGG TGGTGTTCGT CGAAGGGCCG GATGGTCGGC ATGCCGAGCT GAAGTTCGAC
TTCCAGTTGC AGCAGGCCCA GGGCGGTGCC GATGAGCAGC GCAGCGGGCG GCCGCGAGCT
TTGCAGGAGG CCTGA
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| Protein sequence | MTVNISHTAE VQQFFEQAAG FCNAAGNPRL KRIVQRLLQD TARLIEDLDI SEDEFWHAVD
YLNRLGGRGE AGLLVAGLGI EHFLDLLQDA KDQEAGRVGG TPRTIEGPLY VAGAPIAQGE
VRMDDGSEEG VATVMFLEGQ VLDPHGRPLP GATVDLWHAN TRGTYSFFDQ SQSAYNLRRR
IVTDAQGRYR ARSIVPSGYG CDPQGPTQEC LDLLGRHGQR PAHVHFFISA PGYRHLTTQI
NLSGDKYLWD DFAYATRDGL VGEVVFVEGP DGRHAELKFD FQLQQAQGGA DEQRSGRPRA
LQEA
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