| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3165 |
|---|
| Symbol | benK |
|---|
| ID | 1046811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3585804 |
|---|
| End bp | 3587132 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637146587 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | NP_745309 |
|---|
| Protein GI | 26989884 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.660067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCC TTGATGTACA CCCGATCATC GACAATGCGC GCTTTACCCC GTTTCACTGG
ATGGTCATGG CCTGGTGCGG CCTGCTGCTG ATTTTCGACG GCTATGACCT GTTCATCTAC
GGTGTGGTAC TGCCGGTCAT CATGAAAGAG TGGGGCCTGA CCCCGTTGCA GGCTGGTGCA
CTGGGCAGCT ATGCGCTGTT CGGCATGATG TTCGGCGCCC TGGCCTTCGG CAGCCTGGCC
GACCGCATCG GGCGCAAGAA GGGCATTGCC ATCTGTTTCG CCTTGTTCTC GGGGGCGACC
ATCCTCAATG GCTTTGCCAG CAACCCGAGC GAGTTTGGCA TCTACCGCTT CATCGCCGGC
CTGGGCTGTG GCGGCCTGAT GCCCAACGCC GTGGCACTGA TGAACGAATA CGCACCCAAG
CGCCTGCGCA GCACGCTGGT GGCGATCATG TTCAGTGGTT ATTCGCTGGG CGGCATGCTG
TCGGCAGGTG TCGGCATCTT CATGCTGCCG CGTTTTGGCT GGGAGTCGAT GTTCTTCGCC
GCAGCGGTGC CACTGCTGCT GTTACCGGTG ATTCTCTACT ACCTGCCTGA ATCCATCGGC
TTCCTGGTAC GCCAAGGCCG TATCGAGGAA GCACGCACAT TGCTCAAACG GCTGGACCCG
GACTGCGATG TCCAGGCCGA TGATGTGCTT CAGGCGGCCG ACCGCAAAGG CAGCGGCGCT
TCGGTGCTGG AACTGTTCCG CAATGGCCTG GCGATTCGCA CCCTGGCGCT GTGGGTTGCG
TTCTTCTGCT GCCTGCTGAT GGTCTACGCC CTGAGCTCCT GGCTGCCAAA GCTGATGGCC
AACGCCGGCT ACAGCCTGGG CTCAAGCCTG TCATTCCTGC TGGCACTGAA CTTTGGCGGC
ATGGCCGGGG CGATCCTCGG CGGCTGGCTG GGTGACCGCT ACAACCTGGT CAAGGTGAAG
GTGGCGTTCT TCATTGCCGC CGCACTGTCG ATCAGCCTGC TGGGGGTAAA CAGCCCGATG
CCGGTGCTGT ACCTGCTGAT CTTCATTGCC GGCGCCACCA CCATTGGTAC ACAGATTCTG
CTGTACGCCG GCGCTGCACA GATGTACGGC CTGTCGGTGC GCTCTACCGG CCTGGGCTGG
GCCTCGGGCA TCGGCCGTAA TGGCGCCATC GTCGGCCCGC TGCTGGGCGG TGCGCTGATG
GGCATCAACC TGCCACTGCA ACTCAATTTC ATCGCCTTTG CCATCCCTGG CGCCATCGCT
GCGCTGGCCA TGGCCGTGCA CCTGGCCAGT GGTCGGCGCC ACGCCCAGAC CCTGGCGGCG
CAGGCCTGA
|
|---|
| Protein sequence | MRTLDVHPII DNARFTPFHW MVMAWCGLLL IFDGYDLFIY GVVLPVIMKE WGLTPLQAGA
LGSYALFGMM FGALAFGSLA DRIGRKKGIA ICFALFSGAT ILNGFASNPS EFGIYRFIAG
LGCGGLMPNA VALMNEYAPK RLRSTLVAIM FSGYSLGGML SAGVGIFMLP RFGWESMFFA
AAVPLLLLPV ILYYLPESIG FLVRQGRIEE ARTLLKRLDP DCDVQADDVL QAADRKGSGA
SVLELFRNGL AIRTLALWVA FFCCLLMVYA LSSWLPKLMA NAGYSLGSSL SFLLALNFGG
MAGAILGGWL GDRYNLVKVK VAFFIAAALS ISLLGVNSPM PVLYLLIFIA GATTIGTQIL
LYAGAAQMYG LSVRSTGLGW ASGIGRNGAI VGPLLGGALM GINLPLQLNF IAFAIPGAIA
ALAMAVHLAS GRRHAQTLAA QA
|
|---|
| |