| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3164 |
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| Symbol | benD |
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| ID | 1046818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3584985 |
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| End bp | 3585746 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637146586 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | NP_745308 |
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| Protein GI | 26989883 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.457753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.62461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAACA GATTCCAAGG CAAGGTTGCC CTGGTCACCG GTGCCGCCCA AGGCATCGGC
CGGGGCGTGT GCTGGCGGCT GAAGGCTGAA GGCGCGCAAG TGGTGGCGGT AGACCGTTCC
GAGCTGGTCC ACGAACTGGC TGGCGAGGGC ATGCTCACCC TCACCGCCGA CCTGGAACAA
CACGCCGATT GCGCCCGGGT CATGGCCAGC GCGGTGGAAA CCCATGGCCG CCTGGACATC
CTGGTCAACA ACGTGGGCGG CACCATCTGG GCCAAGCCCT TCGAGCACTA CGAAGTCGAG
CAGATCGAGG CCGAGGTGCG CCGCTCGCTG TTCCCCACCC TGTGGTGCTG CCACGCCGCG
CTGCCGTACA TGCTCGAGCG TGGCAGTGGC GCCATCGTCA ATGTCTCGTC CATCGCTACC
CGCGGCGTCA ACCGTGTGCC TTACGGCGCA GCCAAGGGTG GCGTCAACGC GCTCACTGCC
TGCCTGGCCT TCGAAACCGC CGGCCGGGGC ATCCGCGTCA ACGCCACTGC GCCCGGCGGC
ACCGAAGCAC CGCCCCGGCG CGTACCGCGC AACAGTGCAG AGCAAACCGA GCAGGAAAAG
CGCTGGTACC AGCAGATCGT CGACCAGACC CTCGACAGCA GCCTGATGCA CCGCTACGGC
AGCATCGACG AGCAGGTGGG GGCCATTCTG TTCCTCGCGT CCGACGAAGC CTCGTACATC
ACCGGCGTGA CCCTGCCGGT AGGGGGCGGC GACCTGGGCT GA
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| Protein sequence | MNNRFQGKVA LVTGAAQGIG RGVCWRLKAE GAQVVAVDRS ELVHELAGEG MLTLTADLEQ
HADCARVMAS AVETHGRLDI LVNNVGGTIW AKPFEHYEVE QIEAEVRRSL FPTLWCCHAA
LPYMLERGSG AIVNVSSIAT RGVNRVPYGA AKGGVNALTA CLAFETAGRG IRVNATAPGG
TEAPPRRVPR NSAEQTEQEK RWYQQIVDQT LDSSLMHRYG SIDEQVGAIL FLASDEASYI
TGVTLPVGGG DLG
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