Gene PP_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3140 
Symbol 
ID1046799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3555581 
End bp3556768 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID637146562 
Productglycosyl transferase, group 2 family protein 
Protein accessionNP_745284 
Protein GI26989859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.648773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGTG TATTGGGTTG GTTACTGGGC CTGTTGGCGA TCATCGTCCT GGTACCGGTG 
TCGGTGCTGT TGCTGCAAGT GTTGCTGGCT TGCCTGCCGG CGCGGTCCAG GCCCAAGGGC
ATTGGCGAGC GCCCGCGAGT GGCGGTGTTG GTGCCCGCCC ACGATGAGGC GCTGGTCATT
CGTGCGATGC TGGCCAGCGT TACGCCGCAA CTGCTGGACG GCGACCGCTT GCTGGTCGTG
GCAGACAACT GTTCGGATGA CACGGCCCGG TTGGCACGCG CGTCCGGTGC CGAAGTGGTA
GAGCGCCACG ATACGCGCTT GCGCGGCAAA GGTTACGCAT TGGATTTCGG CGTGCGCCAC
CTGGCTCAGC GGCCGCCCGA GGTGGTCATC GTGGTGGATG CCGACTGCCA GGTGGGCGAG
GGGGCGATCG ACTGCCTGGC GCGCCGCTGC CACGCACTTG CCCGCCCGGT ACAGTCGCTG
TATCTGATGC GTGCACCGGC AGGTGCTGGG TTGAGGGTGC AGGTTGCCGA GTTTGCCTGG
CGGGTCAAGA ACCTGGTGCG GCCACGTGGC TGGGCGCGCC TGGGCCTGCC ATGCCAACTG
ATGGGCGCGG GCATGGCGTT CGGCTGGCAC GATCTGAGTC TGATCAACCT GGCCAATGGT
CATCTGGTCG AGGATGTGAA GCTGGGCCTG GACCTTTGCC AGCAGGGCAA ACCGCCTGCT
TTCTGCCCCG AGGCACTGGT CACTAGCCAG TTCCCACTTA GCCAGCAGGG CCTCAACAGC
CAACGTACCC GCTGGGAGCA CGGCCATCTG GGCTTGATGC TTGCCGACGC ACCCAAGCGG
GCGATGGCTG CCATCACCCA GCGTAACGCT AGCCTGGCGG CCTTGACCCT GGACTTGCTG
GTGCCGCCCC TGGCGTTGCT GGTACTGACC TTGCTCGGGC TTAACCTGGT GACCTGGCTG
GCGTACCTGC TGTTCGGCCT GGCGGCGCCC GCGTGGCTCG CCTTTGCCGG TTTGGCCTTG
CTGGCCTTTG CCGTGGTGTT GGCCTGGGCG CGCTTCTGCC GTGAAGTGAT ACCGTTCTCG
GTGCTGCTGT ACGCGCCGTT TTACGCGGCC AGGAAAATTC CCTTGTACCT GAGTTTCCTG
ATCAAGCGCC AGGTTGAATG GGTGCGTTCA AAACGGGATG ACGACTGA
 
Protein sequence
MISVLGWLLG LLAIIVLVPV SVLLLQVLLA CLPARSRPKG IGERPRVAVL VPAHDEALVI 
RAMLASVTPQ LLDGDRLLVV ADNCSDDTAR LARASGAEVV ERHDTRLRGK GYALDFGVRH
LAQRPPEVVI VVDADCQVGE GAIDCLARRC HALARPVQSL YLMRAPAGAG LRVQVAEFAW
RVKNLVRPRG WARLGLPCQL MGAGMAFGWH DLSLINLANG HLVEDVKLGL DLCQQGKPPA
FCPEALVTSQ FPLSQQGLNS QRTRWEHGHL GLMLADAPKR AMAAITQRNA SLAALTLDLL
VPPLALLVLT LLGLNLVTWL AYLLFGLAAP AWLAFAGLAL LAFAVVLAWA RFCREVIPFS
VLLYAPFYAA RKIPLYLSFL IKRQVEWVRS KRDDD