| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3138 |
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| Symbol | |
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| ID | 1046785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3553331 |
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| End bp | 3554332 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637146560 |
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| Product | VirK domain-containing protein |
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| Protein accession | NP_745282 |
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| Protein GI | 26989857 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2990] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.412797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCA CCCTCGTGAA AAGCGTGTTT ACCTTGCAAC CGGGTTACTC GTTGCGGGCG
ATGCACAACA AGTACAAGTT GGCACGGCAG ATCGCCAGGC AGTGGCCTGA GCTGAACGGA
TTCATGCAGC GCATGACGGC GGCGCTGGGG CCGCATGGTC TGCAGCGGCT GGGTGTGGAT
TGTATCGGTG TCGTGCAATG GCCTTACATC AGCCGATGCT GGGAGGCGCC ACAGCGTCTG
GAGGTGGTGG CTACGCACTT TGAACGGGTG GCTGGGCAGT TCCCGGCGTT GCTGTTGCTG
GGGCGCGACG AAAACCTGAG GCTGTGTGAC CTGTCCAGCC ACTCGCCGGG CTGTTGCCTG
GTGCTGGACC GGCCAATCTG GTTCAAGCGC GAAGGCGAGC TGGTGCTGAA CCTGTTCCAG
GCCGACCTGC GTGTGGCATC CCTTGCCTTC ACCCTGGGCC GCAGCCAGGG TGAAACCTGC
CTGTTCATTG GTGCGGTGCA GGGCATCCAC AAAGGTATCG ACAGCGAAAC CTCGCTGGCC
ATCTACCGTG ACCTGACCAA GGACTTCGAA GGGCTGCGGC CACGCAGCCT GTTGCTCGAA
GCGTTGAAAT GCCTGGGCAG AACCTTGGGT GTGACACAGC TGTATGCCGT CAGCGACGCC
TGCCGGCACC ATCGCCATCC CTATTTTGGC AGCGACAAGG GCCAGGACCT GGCGGCCAAC
TACGACGTGA TCTGGCAAGA ACACGGTGCC ACAGCGTCTG ACCGTGAGGA TTTTTTCAGC
CTGCCATTAG CGCCGGCGCA ACGGGCGGAA ACTGACATCC CGGCCAAGAA ACGGGCGATG
TACCGCCGCC GCCAGGCATT GCTCGACGAT GTTTTCACCC GTTTGCAGGC AGCATTGCCA
AGCAGCAATC ACAACCTTGG ACTACAAGGA AAACAGGGGG ATGCATTTGC TGTGAGTGCA
TCGGCAGTAG ACGGACCGCC CGTAGTCGAC AGCCTGAAGT GA
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| Protein sequence | MLGTLVKSVF TLQPGYSLRA MHNKYKLARQ IARQWPELNG FMQRMTAALG PHGLQRLGVD
CIGVVQWPYI SRCWEAPQRL EVVATHFERV AGQFPALLLL GRDENLRLCD LSSHSPGCCL
VLDRPIWFKR EGELVLNLFQ ADLRVASLAF TLGRSQGETC LFIGAVQGIH KGIDSETSLA
IYRDLTKDFE GLRPRSLLLE ALKCLGRTLG VTQLYAVSDA CRHHRHPYFG SDKGQDLAAN
YDVIWQEHGA TASDREDFFS LPLAPAQRAE TDIPAKKRAM YRRRQALLDD VFTRLQAALP
SSNHNLGLQG KQGDAFAVSA SAVDGPPVVD SLK
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