Gene PP_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3132 
Symbol 
ID1046779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3547053 
End bp3548429 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content62% 
IMG OID637146554 
Productpolysaccharide biosynthesis protein 
Protein accessionNP_745276 
Protein GI26989851 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.415164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.282947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGA TTGATGTGTC AGCCGCCGCG AGCCTGCGCA AGCGGGCCTT GAGGGCCGGG 
TCTTGGAACC TGGTCTCGCA GGTGGCTTCA CAGGTGATGC GCCTGGGCGG CAATCTGATC
ATGGCCCGCT TGCTGCTGCC GGAAATGTTC GGGGTGATGG TCATCGCCAC CACTGTTTCG
ATACTGCTGC ATTTGCTTTC CGATGTCGGC CTGCGCCAGA ACATCATCCA GAGCCACCGC
GGAGACGATC CGGACTTTCT CAACACCGCC TGGACCGTGC AGATCATCCG CGGTTTCCTG
CTGTTTGCCC TTACCCTGCT GCTGGCCCTG GGAGCTTGGT TGGCCCAACT GGCTGAGCTG
TGGCCGGCCG ACTCGACCTA TGCCGCGCCG GTACTGCCGA TGGTACTGGC GGTCACCGGC
CTGTCGGCGG CCATCTGGGG TTTCCAGTCC ACCAAGATAG ATGTGGCGGT ACGCACTTTC
CAACAAAAGC GCGTGGTATT GGTCGACCTT GCCTCGCAGG TGGCGGGCCT GGTGGTGATG
CTCGTGCTGG GCTTGCTGAC CCATTCGATC TGGGCGCTGG TGTTATCAGG CCTGGTTTCG
GCGGTCGTCT GGACCGTGCT GGGGCATACC GCCCTGGAGG GGCCCAACAA CCACCTGCGC
TGGGACCGTT CGGCGCTGAC CGAGCTGATC GTGTTTGGCC GCTGGATTCT GTTGTCGTCG
ATGGTCGGCG TGCTGGCGAT GTACGGCGAC CGCATATGGT TTGGCGCCAG CATGTCGGCG
GCGCAACTGG GTGTGTATTC GATCGCCGTG CTGATCCTGG GTGCGGTGCA GACCGCGCTC
ATGAAAATTG TCGGCGCGGT GGCGCTGCCT GCTTTCAGCG AAGCGGCCCG GGCCGACGAC
AAGCCGCGCC TGAAAGCGCT GTATTTCCGC TTTCGGCTGC TGGTCGACCT GCTGGTGCTG
TTCATTTGTG GCGGTTTCCT GACCGCCAGC CCGCTGCTGA TCGGCTGGAT GTATGACGAT
CGCTACCGCG AAGCCGGGCC GATGCTGGCG ATTCTCTCGC TATCGTTCAT CGTATTGCGC
TATACCTTGG CTCATCAGGT GTGGATTGCC TTGGGCCTGA CCAAGTACCA GGCCATGGAC
AACATCATCC GCCTGGTCTC GTTATGGGGG CTGTTGCCGC TGTTACTGGC GATTGGCGGG
GTGGAGTGGG CTATCTGGGG GGTTGCCCTG CATGCTGCGC CAACGCTGGT GCTGGTTGTG
TATGTGAACT GCAAACTGGA TATCTTCAGC CTCAAACGTG AGCTGGTGGT ACTGCCGATG
TTGCTGGTCG GGGCGCTGTG CGGGGCACTG TTGACGGCCT TTTTCAACTG GCTGTAG
 
Protein sequence
MPSIDVSAAA SLRKRALRAG SWNLVSQVAS QVMRLGGNLI MARLLLPEMF GVMVIATTVS 
ILLHLLSDVG LRQNIIQSHR GDDPDFLNTA WTVQIIRGFL LFALTLLLAL GAWLAQLAEL
WPADSTYAAP VLPMVLAVTG LSAAIWGFQS TKIDVAVRTF QQKRVVLVDL ASQVAGLVVM
LVLGLLTHSI WALVLSGLVS AVVWTVLGHT ALEGPNNHLR WDRSALTELI VFGRWILLSS
MVGVLAMYGD RIWFGASMSA AQLGVYSIAV LILGAVQTAL MKIVGAVALP AFSEAARADD
KPRLKALYFR FRLLVDLLVL FICGGFLTAS PLLIGWMYDD RYREAGPMLA ILSLSFIVLR
YTLAHQVWIA LGLTKYQAMD NIIRLVSLWG LLPLLLAIGG VEWAIWGVAL HAAPTLVLVV
YVNCKLDIFS LKRELVVLPM LLVGALCGAL LTAFFNWL