Gene PP_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3126 
Symbol 
ID1046778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3537594 
End bp3538151 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID637146548 
Productpolysaccharide export protein 
Protein accessionNP_745270 
Protein GI26989845 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTT CAATGTTTGC CGCTTTCTGC ATGCTGACGG TGTGGTCTGG TGCCGGTAAC 
GCCGACCAGA GCAGTGCTGC CTACCTGCTC AGCCCCGGCG ATGTGGTGAT GGTTTCGGTA
TGGCAGGAAG AAAGCCTGCG TCAAGAAGCC ACCGTACTTC CCGATGGCAG TATCACCTTC
CCCCTGGCCG GGCGCATCGA TGTCGCCGGG CTGGACGTAA CGGCAGTCGA GAAGCAGGTC
GCTGCCAAAC TCGAAAAATA CCTCCCCGAC CCTAACGTAA GCGTTGTCGT CAAAAGCATT
GCCGGCAACA TGGTCTATGT CCAAGGCAAA GTGATCAAAC CCGGGCCTGT GCAAATGGCA
GGCCCCACGG CGGTGCTGCA GGCGCTGAGC ATGTCGGGTG GCCTGGACAA GTTTGCAGAT
GAAAGCGAAA TCAAGGTGGT CCGCGGCACC GGTGCTTCCC AAAAGATCCT GCCCGTGCGA
TATAAGGACC TGGTGTCTGG GCGGGACATG TCCACCAACA TCCAACTTCA GGCTGGCGAT
ACGCTGGTCG TTCCTTGA
 
Protein sequence
MVRSMFAAFC MLTVWSGAGN ADQSSAAYLL SPGDVVMVSV WQEESLRQEA TVLPDGSITF 
PLAGRIDVAG LDVTAVEKQV AAKLEKYLPD PNVSVVVKSI AGNMVYVQGK VIKPGPVQMA
GPTAVLQALS MSGGLDKFAD ESEIKVVRGT GASQKILPVR YKDLVSGRDM STNIQLQAGD
TLVVP