Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3125 |
Symbol | |
ID | 1046773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3536360 |
End bp | 3536902 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146547 |
Product | Cro/CI family transcriptional regulator |
Protein accession | NP_745269 |
Protein GI | 26989844 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.888864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATCC GATTGAAACT GCTGCGTAAG AAACTGGGGA TGACCCTGGA AATGCTGGCC GAAAAGACTG GCATGACCAA AAGCTACCTG TCCAAGGTCG AGCGCGGCCT CAACACGCCC TCGATCGCTG CGGCGCTGAA ACTGGCGAGG GCGCTGAACG TCAATGTCGA AGAGCTCTTC GCCGAAGAGC AGGCCGGGCA GAGCCGCTAC AGCCTGGTGC GCCGTACCGA GCGCCAGGCC CTGGTTGGCG ATGGGCAAGG GCCGGGGTAC GCGGCCCTCA CCAGTCAGAT TGGCCAGCGC AGCCTGCTGC CGTTTCTGAT TCAGCCGCCG TCCGAGTTCA GCGACCCTAC GTTCAAGGAA CACCAGGGCG AAGAGTTCCT GTTTGTTCAC ACAGGCCAGG TGGAAGTGGA TTTCATGAGT GAGCGGGTGT TGCTGGAGCA GGGCGACGCC CTGCATTTCA ACGCCCAGAC ACCGCACCGG CTGCGCTCGG TAGGTGTGAC GCCGGCGCAG TTACTGGTTG TTGTTCACCA CGCAGACGAA TGA
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Protein sequence | MSIRLKLLRK KLGMTLEMLA EKTGMTKSYL SKVERGLNTP SIAAALKLAR ALNVNVEELF AEEQAGQSRY SLVRRTERQA LVGDGQGPGY AALTSQIGQR SLLPFLIQPP SEFSDPTFKE HQGEEFLFVH TGQVEVDFMS ERVLLEQGDA LHFNAQTPHR LRSVGVTPAQ LLVVVHHADE
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