| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3124 |
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| Symbol | |
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| ID | 1046772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3534865 |
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| End bp | 3536283 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637146546 |
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| Product | short-chain fatty acid transporter family protein |
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| Protein accession | NP_745268 |
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| Protein GI | 26989843 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.04212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.891467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCTG AAATTCAAGA CAGCCGCTCC GCGCGCTTTG CCTTGCGCTG CTCCAACTGG
GCTGAACGCT GGTTCCCCGA CTCCTGGGTG TTCGCCGCGC TGGCGGTGCT GCTGGTGTGT
ATCGGCGCAC TGGCCATGGG CGCCAAACCG ACCGACACCG CCAAGGCGTT TGGCGACGGC
TTCTGGAGCC TGATACCGTT CACCATGCAG ATGGCATTCG TGGTCATCGG CGGTTATGTG
GTGGCCAGCT CGCCGCCCGC CGCGAGGCTG ATCGATCGTT TGGCGCGCAT CCCCGGCAAT
GGGCGCTCGG CAGTGTGCTG GGTAGCACTG ATCTCGATGC TGGCCTCCTT GCTCAACTGG
GGGCTGTCGC TGGTGTTTGG AGGTTTGCTG GTGCGCGCCC TGGCAAGGCG CACCGACCTG
AAGATGGATT ACCGCGCAGC GGGTGCGGCC GCTTACCTGG GCCTGGGTGC GGTGTGGGCG
TTGGGCCTGT CATCCTCGGC GGCGCAGCTG CAGGCCAACC CGGCCAGCCT GCCACCTTCA
ATCCTGTCGA TAACCGGGGT GATCCCCTTT ACCGAAACCA TCTTTCTCTG GCAGTCCGGC
GTGATGCTGG CGGCGCTGGT GGTGGTCTCG CTGGTGATCG CCTACGCCAC CGCTCCGGGC
CCGAACAGCG CCCGTAGCGC AGAAGACTGC GGTGTCGACC CCAGCTTCAC AGCGCCACCC
GCGCCGCAAC GCACGCGCCC GGGAGAGTGG CTGGAACACA GCCCGATCCT TATCCTGCTG
TTGGTGGCCT TGGCTGCTGG CTGGCTGTAT CAGGAGTTTG CGACGAAACC TGCGATTACC
GCCATCTCGG GGCTCAACAC CTACAACCTG TTGTTCATCA TGCTCGGTGC TTTGCTGCAC
TGGCGCCCAC GCAGCTTCCT TGACGCGGTG GCGCGTGCGG TACCGACCAC CACCGGTGTG
CTGATCCAGT TCCCGCTGTA TGGTTCGATC GCCGCCATCC TCACCCAGGT GAAGGGCGTC
GATGAACAGA CCCTGGCCCA CCATATTTCA CTGTTCTTCA CCCAGATTGC CACCCATGAC
ACGTATGCCG TGCTGATGGG CGTGTATTCG GCTGTGCTGG GCTTCTTCAT CCCTTCGGGC
GGCGGCAAGT GGATCATCGA GGCCCCTTAC GTGATGCTGG TGGCCAACGA CCTGCAGTAC
CACCTGGGGT GGGCCGTGCA GATCTACAAC GCGGCCGAAG CCTTGCCGAA CCTGATCAAC
CCGTTCTACA TGCTGCCGTT GCTGGGCGTG CTGGGGCTCA AGGCGCGCGA CCTGATCGGT
TTCTCGTTCG TGCAATTGCT GGTGCATGTG CCGTTGGTGC TGGTGTTGCT GTGGGCGCTG
GGTACAACGC TGCAGTACGT GCCGCCAGTG ATGCCTTGA
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| Protein sequence | MAAEIQDSRS ARFALRCSNW AERWFPDSWV FAALAVLLVC IGALAMGAKP TDTAKAFGDG
FWSLIPFTMQ MAFVVIGGYV VASSPPAARL IDRLARIPGN GRSAVCWVAL ISMLASLLNW
GLSLVFGGLL VRALARRTDL KMDYRAAGAA AYLGLGAVWA LGLSSSAAQL QANPASLPPS
ILSITGVIPF TETIFLWQSG VMLAALVVVS LVIAYATAPG PNSARSAEDC GVDPSFTAPP
APQRTRPGEW LEHSPILILL LVALAAGWLY QEFATKPAIT AISGLNTYNL LFIMLGALLH
WRPRSFLDAV ARAVPTTTGV LIQFPLYGSI AAILTQVKGV DEQTLAHHIS LFFTQIATHD
TYAVLMGVYS AVLGFFIPSG GGKWIIEAPY VMLVANDLQY HLGWAVQIYN AAEALPNLIN
PFYMLPLLGV LGLKARDLIG FSFVQLLVHV PLVLVLLWAL GTTLQYVPPV MP
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