Gene PP_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3117 
Symbol 
ID1043985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3526160 
End bp3526780 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID637146539 
Producthypothetical protein 
Protein accessionNP_745261 
Protein GI26989836 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.579435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCG TGGTCGACCT CGACAGGCTG CTGGAACAGC GCCGGGTATG GCGCGGCCGG 
CAGGCCCAGG CGCGGCCACT CGGGCTGCAG CCCACCGGCC ATGCGGCCCT CGACGAACGT
TTGCCGGAAG GTGGCTGGCC GGCGGCAGCA CTGAGCGAGC TGTTGCTGGC CAACCCCGGT
TGTGGCGAAC TGCAGTTGCT GTGGCCAACC CTGGCTCGGC TGAGTGCAGA AGCCAGCAGA
GTGGTGCTGG TGGCTCCACC CTTCATCCCT TTTGCACCGG CCTGGCAGGC AGCGGGGGTG
GACCTGCGCT GGCTGGTACA GGTGGATGCC GAGCCTGCCG ATGCCCTGTG GGCTGCCGAA
CAGTGCCTGC GCTCGGGCAG TTGCGCGGCG GTGCTGTGCT GGCCGGAACG TGCCGATGAC
CGCGCCCTGC GGCGCTTGCA GGTAGCGGCC GAAACCGGGC AGGCACTGGC GTTCGCCTGC
AGGCCGCAGC AGGCGTCGCA CAACCCTTCA CCCGCAGCGC TGCGCATTGC AGTCGACACA
CGCCCGGCGC AATGGCGCGT GCTGAAAAGC CGGGGTGGCA TGCCACCAGC GCTGCCAATA
CCCTGCCCGG GGCGGGGCTG A
 
Protein sequence
MGAVVDLDRL LEQRRVWRGR QAQARPLGLQ PTGHAALDER LPEGGWPAAA LSELLLANPG 
CGELQLLWPT LARLSAEASR VVLVAPPFIP FAPAWQAAGV DLRWLVQVDA EPADALWAAE
QCLRSGSCAA VLCWPERADD RALRRLQVAA ETGQALAFAC RPQQASHNPS PAALRIAVDT
RPAQWRVLKS RGGMPPALPI PCPGRG