Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3117 |
Symbol | |
ID | 1043985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3526160 |
End bp | 3526780 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637146539 |
Product | hypothetical protein |
Protein accession | NP_745261 |
Protein GI | 26989836 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.579435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCCG TGGTCGACCT CGACAGGCTG CTGGAACAGC GCCGGGTATG GCGCGGCCGG CAGGCCCAGG CGCGGCCACT CGGGCTGCAG CCCACCGGCC ATGCGGCCCT CGACGAACGT TTGCCGGAAG GTGGCTGGCC GGCGGCAGCA CTGAGCGAGC TGTTGCTGGC CAACCCCGGT TGTGGCGAAC TGCAGTTGCT GTGGCCAACC CTGGCTCGGC TGAGTGCAGA AGCCAGCAGA GTGGTGCTGG TGGCTCCACC CTTCATCCCT TTTGCACCGG CCTGGCAGGC AGCGGGGGTG GACCTGCGCT GGCTGGTACA GGTGGATGCC GAGCCTGCCG ATGCCCTGTG GGCTGCCGAA CAGTGCCTGC GCTCGGGCAG TTGCGCGGCG GTGCTGTGCT GGCCGGAACG TGCCGATGAC CGCGCCCTGC GGCGCTTGCA GGTAGCGGCC GAAACCGGGC AGGCACTGGC GTTCGCCTGC AGGCCGCAGC AGGCGTCGCA CAACCCTTCA CCCGCAGCGC TGCGCATTGC AGTCGACACA CGCCCGGCGC AATGGCGCGT GCTGAAAAGC CGGGGTGGCA TGCCACCAGC GCTGCCAATA CCCTGCCCGG GGCGGGGCTG A
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Protein sequence | MGAVVDLDRL LEQRRVWRGR QAQARPLGLQ PTGHAALDER LPEGGWPAAA LSELLLANPG CGELQLLWPT LARLSAEASR VVLVAPPFIP FAPAWQAAGV DLRWLVQVDA EPADALWAAE QCLRSGSCAA VLCWPERADD RALRRLQVAA ETGQALAFAC RPQQASHNPS PAALRIAVDT RPAQWRVLKS RGGMPPALPI PCPGRG
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