| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3106 |
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| Symbol | |
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| ID | 1043953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3508370 |
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| End bp | 3510226 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637146528 |
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| Product | hypothetical protein |
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| Protein accession | NP_745250 |
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| Protein GI | 26989825 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.166384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACTG ACGTTCTTTC CATGCTCGCG CCGCAAAACA GGCGATTGTT CAAGCTGAAT
ATCCTGACAC AAACAGCCAA CGATGAGTTT TTGCTGGAGC ACTTTTCCGG CACTGAAGAG
CTTTCCAAAC TCTATGAATT CGATCTGGCC TTGCTCAGCC AACAGAGCGA TGTAAAGCTC
AAGTCACTGA TTGGCAGCCA GGCCACGGTA GAAATAGAGT TATCCAACGG CTCTTTCCGC
CACATTAACG GCTATGTTCA GCGGTTTAGC ACCCAAGGCA GCGACGGCGG CTATGTGCGT
TATGCAGCCG TGCTAGGGCC GTGGCTGTGG ATGCTGACTT GCCGTTTCGA TACACGCATT
TTTCAAGAAA AATCGGTCCA GGCTGTTGTC AGTGAAGTGT TCGCCGGATT TGGCACGCTG
GCCAAGTACG AATTTCGTGT AAGCAAGCCG CTCAAATCGC ACAGCTACAT TACCCAGTAC
CGCGAGAGCG ATTTCAACTT TGTGCAGCGC TTGCTTGAGA GCGAAGGGCT TTTCTACTAC
TTCGAGCACA CGGCCGACTC CCACCTGATG GTCATCACCG ATGACTCCAG CACCTTGTTG
CCGCTGCCCG AACAGCCGCA GATTCGCTAC CACTCCGCGT CGGTTACCGA AACCGCTGAT
TCCATTACTC AGTGGCAGTC AACGCGGCAG CTGCAATCCG GTCAAATTGC CGTTCGCACG
TTCGACTATC GCCAACCGCG CAACTTCCTA CCTGTGACCA TGCAAAGCTT GAATCAACAG
GGCGATGTGG ACAGGTTCGA GATTTATGAT TTCCCGGGCC AGTACACCCA TGGCAGCTAC
GAAGATGGCG AAGCCATCGT ACGCAACCGT ATCGAAGCGC TCGAGTTGAT GGGCAAGACC
TTCTACGGCG AGAGCAATTG CCGGGCCATG AAGCCGGGTT ACACTTTTGA GTTGACCCAG
CATTATCTGC ACGACACCGG TGCCGCCGAG AACCGTAAGT TTTTGTTGCT GAGCGTGGAG
CATCGCGGCA GCAACAACTA CATGACGGGC GACCAGGCCG GTTACGTCAA CCGATTCGTG
TGCGTGCGTA AAAAAATCGC ATACCGCCCG CAGTTGAACA CCCGCAAGCC TTTGATCAAC
GGCCCGCAGA CCGCCATCGT TGTCGGCCCC CCAGGCGAGG AAATCTTCAC CGACGAACTG
GGCCGGGTAA AGCTTCAGTT TCACTGGGAT CGCCAGGGGC AGTTCAACGA TCAAAGCTCC
TGCTGGGTAC GTGTCGCCCA GTCCGGTGCC AGCGGTGGCT TCGGCAGCAT CCAGATTCCG
CGCGTAGGCG ACGAAGTGGT GGTGGTGTTC CTGGACGGCA ACCCGGACCG GCCGCTGATC
ATGGGCAGCC TGTACAACAG CACCAACACC CCGCCATGGT CGCTGCCGGC GAACAAGACC
CAGAGTGGGT TCCTGACGCG GTCGATGAAG GGCGACGGCG GTACCGCCAA CTTCTTCCGC
TTCGAGGACA AGGCCGGCGC CGAGCAGATC ATCATGCATG CCGAGCGCAA CATGGATACC
GAGATCGAGC TGGATGAGAC CCACGATGTG GGGAATAACC GCTCGATTAC TGTTGGTGGT
ACGCATACCG AAACGGTCAA GAAAGACACC GTGGTGCAGG TGACCGAGGG TTCCTACACC
CTGCAGGTCG ACAACCAGTT CATCCAGGTG GCCGCCAAGC AGCACATCAT CCTGCAGGTG
GGCGACAGCA GCATCACGCT GACCCCGGAA GGCATCGAGA TCAAAGGCAA GGTCATCGTG
ACCACCAGTA CCGACACCAC CCAGATCACT GGCGCCGCAG TGCGGATCAA CGACTGA
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| Protein sequence | MLTDVLSMLA PQNRRLFKLN ILTQTANDEF LLEHFSGTEE LSKLYEFDLA LLSQQSDVKL
KSLIGSQATV EIELSNGSFR HINGYVQRFS TQGSDGGYVR YAAVLGPWLW MLTCRFDTRI
FQEKSVQAVV SEVFAGFGTL AKYEFRVSKP LKSHSYITQY RESDFNFVQR LLESEGLFYY
FEHTADSHLM VITDDSSTLL PLPEQPQIRY HSASVTETAD SITQWQSTRQ LQSGQIAVRT
FDYRQPRNFL PVTMQSLNQQ GDVDRFEIYD FPGQYTHGSY EDGEAIVRNR IEALELMGKT
FYGESNCRAM KPGYTFELTQ HYLHDTGAAE NRKFLLLSVE HRGSNNYMTG DQAGYVNRFV
CVRKKIAYRP QLNTRKPLIN GPQTAIVVGP PGEEIFTDEL GRVKLQFHWD RQGQFNDQSS
CWVRVAQSGA SGGFGSIQIP RVGDEVVVVF LDGNPDRPLI MGSLYNSTNT PPWSLPANKT
QSGFLTRSMK GDGGTANFFR FEDKAGAEQI IMHAERNMDT EIELDETHDV GNNRSITVGG
THTETVKKDT VVQVTEGSYT LQVDNQFIQV AAKQHIILQV GDSSITLTPE GIEIKGKVIV
TTSTDTTQIT GAAVRIND
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