| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3100 |
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| Symbol | |
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| ID | 1043948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3496225 |
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| End bp | 3496800 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637146522 |
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| Product | hypothetical protein |
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| Protein accession | NP_745244 |
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| Protein GI | 26989819 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.310088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCGCA GCGAATTGCT CGCACTGGAG AACACGATGG CGAAGAAGGA AAGCACTCAG
CACAAACTCG ACCGCGTTCG CGCGCCTCGG GTCCATATCA CCTACGACGT GGACATCGGC
GATGCCATCG AGAAAAAGGA GCTGCCCTTC GTCGTCGGCG TACTGGGTGA CTTCTCCGGC
AACCCGCCGG AGCCGCTGCC CAAGCTCAAG GACCGCAAGT TCGTGTACAT CGATCGCGAC
AACTTCAACG GTGTGCTCAA GGGCATCAAG CCACGCCTGA CCTACCGCGT CGACAACACC
CTGGCCAAGA ACGGTACCCA GTTGGGCGTG GAGCTGAACT TCAACAGCCT CGAAGACTTC
GAGCCACAGA ACGTGGTCAA GCAGGTCGAG CCGCTGCGCA AGCTGCTGGA AGTGCGCAAC
AAGCTGGCCG ACCTGCGCAA CAAGATGGGC GGCAACGACA AGCTCGAAGA GCTGCTGATG
GACGTGCTGC AGAACACCGA AAAGCTCAAG ACCTTGGGCA AGGAATTCGG CCGTGAAGCC
GAAGTGAAAG ACCCGTCCAG CGACGATCGC GCCTGA
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| Protein sequence | MIRSELLALE NTMAKKESTQ HKLDRVRAPR VHITYDVDIG DAIEKKELPF VVGVLGDFSG
NPPEPLPKLK DRKFVYIDRD NFNGVLKGIK PRLTYRVDNT LAKNGTQLGV ELNFNSLEDF
EPQNVVKQVE PLRKLLEVRN KLADLRNKMG GNDKLEELLM DVLQNTEKLK TLGKEFGREA
EVKDPSSDDR A
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