Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3099 |
Symbol | |
ID | 1043952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3494708 |
End bp | 3496210 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146521 |
Product | hypothetical protein |
Protein accession | NP_745243 |
Protein GI | 26989818 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA AGCAAACCGC ACCGCAACAG GCCGGCGACC TGGTCGAAGT GGAAAACTTC GCACCACAGC CCTCGCTGCT CGACAGCATC ATTTCGCAAA GCCGCGTGGC CCGCTCCGAC ACCGAGCGCA ACCGCACCCG CGACCTGATT GGCGAACTGG TGAACCAGGT GCTCGAGGGT GAGATGACCC CGAGCAAGGA CCTGATCGCC GTGCTCGATT CGCGCATCGC CGAGATCGAC GCGATGCTCT CCGAGCAGAT GAACGAGATC ATGCACGCCC GCGAGTTTCA GCAGTTGGAA GCCTCCTGGC GCGGCCTGAA ATACCAGGTA GACCAGACCG AGACCAGCAC CACGCTGAAG ATCCACCTGC TCAATGCCTC GAAGAAAGAC CTGGTACGCG ACCTGAAGGC CGCCAGCGAA TTTGACCAGA GCGCACTGTT CAAGAAGGTC TACGAAGAAG AGTACGGCAC CTTCGGTGGC GCGCCTTTCG GCATGTTGAT CGGTGACTAC GAGTTCAACC GCAACCCTGA AGACATGTAC CTGCTCGAAG AGATCTCGCA CGTCGCGGCG GCGGCGCACG CGCCGTTCAT CTCGGCCGCT TCGTCCGAGC TGTTCGGCTG GGACTCGTTC ACCGAGATGT CCGGCCCGCG TGACCTGGCG AAGATCTTCG ACACCGTGGA ATACGCCAAG TGGAAGTCGT TCCGCGCCTC GGAAGACTCG CGTTACGTCG GCCTCACCCT GCCCCACGTG CTCGGTCGCC TGCCGTATGG ACCGGATACC ACCCCGGTGG AAGAATTCAA CTTCGTCGAA AGCGTCGATG GCCGCGACCA CAACAAGTAC CTGTGGATGA ACGCCGCCTA CGCCCTCGGC ACCCGGGTCA CCGATGCCTT CGCCCGCTAC GGCTGGTGCG TGGCCATCCG CGGCGTGGAA GGTGGCGGCC TGGTCGAAGG CCTGCCGACC CATACCTTCA AGACCGACGA CGGCGAAATC GCCCTCAAGT GCCCGACCGA AATCGCCATC ACCGATCGCC GCGAAAAAGA GCTGTCGGAC CTGGGCTTCA TCCCCCTGGT GCACTGCAAG GGCACCGACT ATGCCGCGTT CTTCGGCACC CAGTCGGCGC AGAAACAGAA GCAGTACAAC ACCGACATCG CCAACGCCAA CGCACGCCTG TCGGCCCAGC TGCAATACAT CTTCGCCACT TCGCGCATCG CCCACTACAT GAAGGCGATC ATGCGCGACA AGATCGGCAG CTTCGCCTCG CGCATGGATG TCGAGCGCTT CCTCAACCAG TGGCTGGCCA GCTACGTGCT GCTCGACGAT ACCGCCAGCC AGGAGGCCAA GGCCAAGTTC CCGCTGCGCG AAGCCCGCGC CGAGGTGTTC GAAGTGCCCG GCAAGCCAGG CGTGTACAAG GCCGTGACCT ACTTGCGCCC GCACTACCAG CTGGATGAGC TGACCGCCTC GCTGCGGCTG GTTGCCGAGC TGCCACAGGG CGCGCGCGGC TGA
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Protein sequence | MTDKQTAPQQ AGDLVEVENF APQPSLLDSI ISQSRVARSD TERNRTRDLI GELVNQVLEG EMTPSKDLIA VLDSRIAEID AMLSEQMNEI MHAREFQQLE ASWRGLKYQV DQTETSTTLK IHLLNASKKD LVRDLKAASE FDQSALFKKV YEEEYGTFGG APFGMLIGDY EFNRNPEDMY LLEEISHVAA AAHAPFISAA SSELFGWDSF TEMSGPRDLA KIFDTVEYAK WKSFRASEDS RYVGLTLPHV LGRLPYGPDT TPVEEFNFVE SVDGRDHNKY LWMNAAYALG TRVTDAFARY GWCVAIRGVE GGGLVEGLPT HTFKTDDGEI ALKCPTEIAI TDRREKELSD LGFIPLVHCK GTDYAAFFGT QSAQKQKQYN TDIANANARL SAQLQYIFAT SRIAHYMKAI MRDKIGSFAS RMDVERFLNQ WLASYVLLDD TASQEAKAKF PLREARAEVF EVPGKPGVYK AVTYLRPHYQ LDELTASLRL VAELPQGARG
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