| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3089 |
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| Symbol | |
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| ID | 1043778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3478058 |
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| End bp | 3478600 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637146511 |
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| Product | hypothetical protein |
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| Protein accession | NP_745233 |
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| Protein GI | 26989808 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTTAA TGGAGAGTTT CACAATGGCA TTTGACGCGT ATATCCAAAT CGACGGCATC
CCAGGCGAAG TACTGGATGA AAAACACAAG GACTGGATCG AAGTGCTGGG CTACGAGTAC
GGCGCCACCC AGGCTACGTC GGCAACCGCC AGCTCCTCGG GCGGTGCGTC CTCCGAGCGC
GTTGCCCTGA GCGACTTCAA GATCCGCAAG GCAGTCGACA AGGCATCGGC CAAACTGTTC
GAACACTGCT GCACCGGCAA GCACATCGCC AAGCTGAAGC TGAACGTGAA CCGTGCCGGT
GGCGACAAGG TCACCTACCT GACCATCGAC ATGGAAGAAG TGGTGGTCTC TTCGGTCAAG
TTTGTCGCCG GTGGCAACCA GAGTGGTGAA GACAAGGCGG TCAGCGACCT GCCCGTTGAA
GAAATCAGCT TCAACTTTGC CCGCATCAAG ACCACCTACA CCCAGCAGAA CCGCACCGAC
GGCCAGGCCG GCGGCAACAT CGTGGGTGGC TGGGACCGCA CCGCGAACAA AGTGTTTGCC
TAA
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| Protein sequence | MLLMESFTMA FDAYIQIDGI PGEVLDEKHK DWIEVLGYEY GATQATSATA SSSGGASSER
VALSDFKIRK AVDKASAKLF EHCCTGKHIA KLKLNVNRAG GDKVTYLTID MEEVVVSSVK
FVAGGNQSGE DKAVSDLPVE EISFNFARIK TTYTQQNRTD GQAGGNIVGG WDRTANKVFA
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