| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3081 |
|---|
| Symbol | |
|---|
| ID | 1043587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3466346 |
|---|
| End bp | 3466822 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637146503 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | NP_745225 |
|---|
| Protein GI | 26989800 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.625763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTCA GTTCCTCGTC TTTCACTGAT GGCGGCGTCA TTGCCCTGCA ACAGGTCGGC
CAGGACCCGG CATGCGGTGC CGGTGAAGAG CGGACCCCGC AACTGAGCTG GGACAACCTG
CCCGCAGGTA CGCGGTCGCT GGCCCTGATC ATGTTCGACC CGGACGGTGG CAAGGGTGTG
GGTGTGGTGC ACTGGGTGGC CTACAACATC GATCCCGAAC ACGATGGGCT CAAGGAAGGC
ATGGCGGGGG TGAGCGGCCC CTACGTGACA GTGGGCCGCA ACTCCCGTGG CACCCAGAGC
TACCGCGGCC CCTGTCCACC CGCCGGCGAC AACCCCCATC ATTACGCCCT GACCCTGATT
GCCACCGACC TGCCCTTGGG TACCTTGCCC GAGGGGCTGG ACCGCAGCGG CCTGCTGCAA
CTGCTGCAAG GCCACGCCCT AGGGGCGCAG AGCCTGGTCG GGCGCTACGG CCATTGA
|
|---|
| Protein sequence | MSVSSSSFTD GGVIALQQVG QDPACGAGEE RTPQLSWDNL PAGTRSLALI MFDPDGGKGV
GVVHWVAYNI DPEHDGLKEG MAGVSGPYVT VGRNSRGTQS YRGPCPPAGD NPHHYALTLI
ATDLPLGTLP EGLDRSGLLQ LLQGHALGAQ SLVGRYGH
|
|---|
| |