| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3074 |
|---|
| Symbol | |
|---|
| ID | 1043479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3457296 |
|---|
| End bp | 3458687 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637146496 |
|---|
| Product | citrate transporter |
|---|
| Protein accession | NP_745218 |
|---|
| Protein GI | 26989793 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.846868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TCATCGCACT CGCTGCTTTG GCCTTGCTGA TGCTGGCCGC CTACCGCGGT
TACAGCGTAA TCCTCTTCGC CCCCATCGCC GCCCTCGGCG CTGTCCTGCT CACCGACCCT
GCCGCCGTCG CCCCTGCGTT CACGGGGGTG TTCATGGAAA AAATGGTCGG TTTCATCAAA
CTGTACTTCC CGGTATTCCT GCTGGGGGCG GTGTTCGGCA AGCTGATCGA GCTGTCCGGT
TTCTCCCGCT CGATCGTCGC CGCGGCCATC CGCCTGCTCG GCACCCGCCA GGCGATGCTG
GTCATCGTAC TGGTCTGTGC CCTGCTTACT TACGGCGGTG TTTCGCTGTT CGTGGTGGTG
TTCGCGGTGT ACCCGTTCGC CGCCGAAATG TTCCGTCAGA GCAATATCCC CAAACGCCTG
ATCCCGGCCA CCATCGCCCT GGGCGCATTC TCGTTCACCA TGGACGCCCT GCCCGGCACC
CCACAGATCC AGAACATCAT CCCCAGCACC TTCTTCAACA CCACCGCCTG GGCCGCACCG
TGGCTGGGCC TGATCGGCAC GCTGTTCGTG TTCTTTACCG GCATGGCCTA CCTGCAGCGC
CAGCGCAACA AGGCCCAGCG CGCCGGTGAA GGTTATGGCA CCGACTTGCG CAACGAACCG
GAAACCGCTG CCGACCTGAG CCTGCCCAAC CCTTGGCTGG CGCTGTCGCC GCTGATACTG
GTGGGGGTGA TGAACCTGGT GTTCACCCAC TGGATACCGC ATTGGTACGG CCCCAGTCAC
AGCCTGCAAT TGCCAGGCAT GAGTGCACCG GTACAAAGCG ACGTGACCAA GCTGACGGCC
ATCTGGGCTG TGCAGGCCGC GTTGCTGGTG GGCATCCTGA TGGTCCTGGT GTGCGCCTTT
GGCGCCATTC GTACACGCCT GGCCGAAGGC ACCAAAAGCG CGGTGGGTGG TGCCTTGCTG
GCAGCCATGA ACACCGCTTC GGAATACGGC TTTGGCGCGG TAATCGCCTC GCTGCCGGGT
TTTCTGGTGC TGGCCGATGC CCTGCGCAGC ATCCCCAACC CCTTGGTGAA CGAAGCCATC
ACCGTGACCT TGCTGGCCGG CATCACCGGC TCCGCTTCGG GCGGCATGAG CATCGCCTTG
GCAGCCATGG GCGACACGTT CATCGCCGCC GCCCACGCGG CCGATATCCC GCTGGAAGTG
CTACACCGGG TAGCCGCCAT GGCCAGCGGT GGCATGGACA CCCTGCCGCA CAATGGCGCG
GTGATCACCT TGCTGGCGGT GACCGGCCTC ACCCACCGCG AGGCCTACAA GGACATTTTT
GGTATTACCC TGATCAAGAC CCTGGCGGTG TTCGTGGTCA TCGCCACGTT CTACGCCACT
GGCATCGTCT AA
|
|---|
| Protein sequence | MTVLIALAAL ALLMLAAYRG YSVILFAPIA ALGAVLLTDP AAVAPAFTGV FMEKMVGFIK
LYFPVFLLGA VFGKLIELSG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV
FAVYPFAAEM FRQSNIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFNTTAWAAP
WLGLIGTLFV FFTGMAYLQR QRNKAQRAGE GYGTDLRNEP ETAADLSLPN PWLALSPLIL
VGVMNLVFTH WIPHWYGPSH SLQLPGMSAP VQSDVTKLTA IWAVQAALLV GILMVLVCAF
GAIRTRLAEG TKSAVGGALL AAMNTASEYG FGAVIASLPG FLVLADALRS IPNPLVNEAI
TVTLLAGITG SASGGMSIAL AAMGDTFIAA AHAADIPLEV LHRVAAMASG GMDTLPHNGA
VITLLAVTGL THREAYKDIF GITLIKTLAV FVVIATFYAT GIV
|
|---|
| |