| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3063 |
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| Symbol | gpU |
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| ID | 1043597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3444518 |
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| End bp | 3445363 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637146485 |
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| Product | pyocin R2_PP, tail formation protein |
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| Protein accession | NP_745207 |
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| Protein GI | 26989782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3499] Phage protein U |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0949422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.702091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACA TGGAACTGCT GGAGTCGTCA CTTTCCAGCC TGGTTGCAGC GGGGGAAGCC
GGCCGGAAAG GCGCCGACGG CATGCTGGTA CCGCTCAACG GCGCTATCAG CAGCATTACC
GGTGCTGCGT CCGAACTGGA AAGCATCCCG TTTCTACCGC CTGAGATGGG CGCCAAGGCG
GGCCGCTTGG TGCGCAGCAT CGGCGTTGCG CAAGCCCGTG TCGGGCAAGT CACGTCGATG
TATAGCCGCG CTGTATCGGG CGTCAGTCAG GTGCAAGAAC GCCTTGGCAC GTTCAAGCAG
ATGGCCAGCA AGGTGTCGTC GGAGGTCGGC CGGGTGGCTG GCAAAATCAG CCCCTCGCTG
TCCAACATCC TGCCCAGCGG CGGGCTGTTG GCCTCGGTTA CGCCGACGCC GGAGGCTGTG
GCGCCGTTCC CGCACCTGTT GATCATCCAG CCGCATGAAC CCAACGCCCA GCCGTATTAC
TTCAACCTCG GCACGGCCGC GTTTGACGAG CTGCGCCGAC AGGCGTCGTT TCGTTGGGCG
GGGCAGGAGC GCCTGCGCCG CAGCGTGGCG CAGCAGGCCG TGGGCCTGGG TGAAGAAAAG
ATCACGCTCA AGGGCGCGAT CTTCCCCAAC CATAAGGCCG GGCTCAAGCA GCTCAACACT
CTGCGCTCCA TCGGCCGCAA CCTGCGGGCG TTGAACCTGG TGACGGGCTA CGGCGAGGTG
CTGGGCGAGT GGTGCCTGGT CAGCATCGAG GAGGAACAAA GTCACCTGTT GCCGGGCGGC
ATCCCTCGAA AACAAGGCTT TACCCTGGAG TTTGTGAGCT ATGGCAACGA CCTGCAGAAC
GTCTGA
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| Protein sequence | MAYMELLESS LSSLVAAGEA GRKGADGMLV PLNGAISSIT GAASELESIP FLPPEMGAKA
GRLVRSIGVA QARVGQVTSM YSRAVSGVSQ VQERLGTFKQ MASKVSSEVG RVAGKISPSL
SNILPSGGLL ASVTPTPEAV APFPHLLIIQ PHEPNAQPYY FNLGTAAFDE LRRQASFRWA
GQERLRRSVA QQAVGLGEEK ITLKGAIFPN HKAGLKQLNT LRSIGRNLRA LNLVTGYGEV
LGEWCLVSIE EEQSHLLPGG IPRKQGFTLE FVSYGNDLQN V
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