| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3054 |
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| Symbol | gpJ |
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| ID | 1043463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3435086 |
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| End bp | 3436066 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146476 |
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| Product | pyocin R2_PP, baseplate/tail fiber protein |
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| Protein accession | NP_745198 |
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| Protein GI | 26989773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3948] Phage-related baseplate assembly protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.186088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC TTTCCCTGCT GCCTCCGCCC GACGTGGTGG AGAGCGTGGA TTTCGAGGAG
CTGTATCAGG AAACACTGGG CATCTTCCGC GAGTTCATGA AGGACCAATG GACGGCGGCG
CTGGAGTCCG ACCCGGTGGT CAAGCTGATG GAAGTCATGG CCTACCGGGA AATGCTCACA
CGTGCGCGGG TCAACGCGGC GGCCAAGGCA AGTTTGCTGG CCTTCGCCAA GGGTAACGAC
CTGGTGAACC GCGCCGCTGA TTACGGTGTG GAGAAGCTGG TTATCCGCCC GGCTGATCCT
GATGCGGTGC CGCCGGTAGA GGCGGTAATG GAGGGCGACG AAGCGCTGCG CTACCGCACG
CGGCTGTCGC TTGAGGCCTT GTCGGTAGCC GGCAGCAGCG GCGCCTATGA GTATCACGGG
CTGAGCGCGT CGGCCGAGCT GACCAACGTG TCGGTCGATT CGCCCCGGTT TGTTGAGGCG
GAGTTGACCC CCGAGGTACG GGCCCAGCTG CCGGCCGGGG CCATTGTGGT GGTCTGCGAC
TACGACGCGG GCCTGGCCAA CCCACTGCCC GGCGATGTGT CGCTGGCCAT CCTGCCCAGT
CTGTCCAGCA CCACACCCGT GGCCCAGCTG GTGGCCAAGG TCAAGGCCGC CCTGTCGGCC
GAGGAAGTAC GACCAATCAC CGACCGGCCC CGCGTGGCCG CCGGCGTACC GACTGAGTTC
AAGGTGGAGG CCGAGCTGCA GATCGAGGAA GGGCCAGACC CTGACGTGGT GAAGGCCACG
GCGCGGGCTG GCCTGAATGC GGCCATTGCA GAAGCCCGTC GCCTGCAGGG GCAGTTGCCC
CTGTCGGCCA TCTATGCCGC GTTACACGTA ACGGGGATTC GTAGCGTGAC CTTGAAGCAT
CCAGCGGCCG GGGTGGTGTG TGATAAGCGG CATTACCCCA GTTGCACGTC GGTTACGCTG
ACGTCGAAGG TGGTGACATG A
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| Protein sequence | MIDLSLLPPP DVVESVDFEE LYQETLGIFR EFMKDQWTAA LESDPVVKLM EVMAYREMLT
RARVNAAAKA SLLAFAKGND LVNRAADYGV EKLVIRPADP DAVPPVEAVM EGDEALRYRT
RLSLEALSVA GSSGAYEYHG LSASAELTNV SVDSPRFVEA ELTPEVRAQL PAGAIVVVCD
YDAGLANPLP GDVSLAILPS LSSTTPVAQL VAKVKAALSA EEVRPITDRP RVAAGVPTEF
KVEAELQIEE GPDPDVVKAT ARAGLNAAIA EARRLQGQLP LSAIYAALHV TGIRSVTLKH
PAAGVVCDKR HYPSCTSVTL TSKVVT
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