Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3038 |
Symbol | |
ID | 1043338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3421840 |
End bp | 3424050 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146460 |
Product | TraC domain-containing protein |
Protein accession | NP_745182 |
Protein GI | 26989757 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria [COG5545] Predicted P-loop ATPase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.35161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATA AGGTTCTTGA CCAGTTGCAT GACTACGGCC TGCATCCTGA CCAGCCTTTG GTCTTCGGCA AGCTGACCCG CTGCCGCACC AAGGATGACA AGGGCAAGGA AAAGAACGGT TGGTATGTCC TGCATGAGCA TCTGGCCGAG AAGGGACAAA CCCTGATCTT CGGAAGCTTT GGCGATTGGC GCCTGGGCGA AACGCAGAAG GTGAAGACCG ACGGCCGAGG GCTGACCCCC GACGAGCGTG AAGTGATGCG CGCCCGGCAG GCTGACGCCA AACGGCGTGC TGCAGAGATC GCCGCGAACG CTGCACGCCG TGCGGCCAAG CGTGCGGAAG CGCTGTTCAA GCGTATGCCC GAAAAGGGGC GTAGCGCCTA CCTGGATCGA AAGCAGGTTG TCGGTTTCGG CGTCCGCTAT GCGCCGAAGT CGGGCGCGGT GCTGGTTCCG ATGCAGAATG CTCAGGACGC CATTGTCGGC CTGCAGGTAA TTTTCCCGGC TGTCCAAGAG GATACGGGGC GGGACAAGTC CTACTGGCCG CATGGCATGG CCAAGGATGG TGCTTTCCAC ATGATTGGTG GCCATCCTGA GCCCGGTGAG CCTGTGCTGG TGTGTGAGGG CTACGCCACC GGGGCTAGCC TGCACATGGC GACCTCCCAG GCGGTGGCCA TCGCCTTCGA TGCGGGCAAC CTGATGGCGG TCGCCAAGCA TATGCGTGAA CGCTTCCCTG GTCGGTCCAT CATCATATGC CGCGATGACG ACTGGAAGAC CAAGCGGCCG ACGGGCGAAC CCTGGAATCC TGGTGAGGAA AAGGCCAACA ATGCTGCGGT GGTTGTGGGT GGCCAGGTAG TCGGCCCGAT CTTCTCGGCT GAGCGTGAGG TTAAATGGAC CGACTTCAAC GACCTGCATT GCGCTGAAGG CCTTGAGGCC GTTCGCCGGC AAGTCACGGC AGTGATCAAG CCACCGGCTA CCGGTGGCTG GAAGGACATG CTGGCCAGGA CTGAGAGTGG TGCCCTGATC GCCCATATGC AGAACGTCGA ACTGATCCTG GCCAATGATG AGCGCTGGAG CGGGGTGATC GGTTACAACG CCTTCAGCTC CAAGATCATG CGCCTTCGTG CGGCGCCTTA TGGCGGTGTG CCGGGGGAGT GGAGCGACAT CGACGACATG CGCGTGATGA AGTGGTTGGC TCAGCAGGGC CTGCGCGTGA AGGCCTCTCA TGTGGTCGAA GCGGTCAGTG TCGTCGCGCA CGACAACGCG TTCCATCCGG TATGCACCTA CTTGGCCAGG CTCGAATGGG ATCGTGTGCC GCGCCTGGAG CGCTGGCTGC ATGAGATCTT CGGTGTCCCC CGGAATGAAT ACAGCTCCAA GGTGGGCAAG CGCTGGATGA TATCGGCGGT GGCACGGGTG ATGAAGCCCG GCTGTAAAGC GGACGCGGTG CTGATCCTCG AAGGTGCGCA GGGCGCGGGT AAGTCCTCGG CCTTGGGCGT CCTTGGTGGC GACTGGTTCA TGGATACACC GTTCACCCTG GGGGACAAGG ACGCGTTCCA AGCCATCCGA GGTAAGTGGA TCGTCGAGCT GGGCGAATTG GACAGCTTCA ACAAGGCAGA GAGCACCAAG GCCAAGCAAT TCTTCTCGGC ATCTATCGAC ACTTACCGCG AAAGCTATGG GCGAAGAACG AGTGACGTGC CACGTCAGTG TGTTTTCGCG GGTACCACCA ACCAGGATGA ATACCTTAAG GACGCCACCG GTAACCGGCG TTATTGGCCG GTCGCTTGCG TCAAGGTGGA CCTTGAAGCA TTGCGTCGCG CTCGTGACCA GCTGTGGGCT GAGGCCATGT TCTGCTACCA GGCCGGTGAT ATCTGGTGGG TGACCCGTGA GGAGGAAGAA CTGTTCACTG CAGAGCAGGA AGAGCGCTTC GTGGTAGATG AATGGGAGGG GCCGATCCTG AAATGGTTGG AGGAATCCCA GGCCGGCGAG ACGGTCACCG GAAGCGAAGT GTTGGGGCAG GCATTGAACC TTGACCCTGG CCACTGGGGC AAGCCTGAGC AGATGCGGGT GGGATCGATC ATGCACCGCC TAGGTTGGCG GCGTCGCAGG CTGGCTGCGC TGCCGAAGAG CGGTAAGCGC CCTTGGGCAT ATCAGAAGCC TGATGGTTGG GGGCGCAGCG CCTTGGAGCA GTCCACGCAG CCGAAGGAGG AGTGCTTTTG A
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Protein sequence | MLDKVLDQLH DYGLHPDQPL VFGKLTRCRT KDDKGKEKNG WYVLHEHLAE KGQTLIFGSF GDWRLGETQK VKTDGRGLTP DEREVMRARQ ADAKRRAAEI AANAARRAAK RAEALFKRMP EKGRSAYLDR KQVVGFGVRY APKSGAVLVP MQNAQDAIVG LQVIFPAVQE DTGRDKSYWP HGMAKDGAFH MIGGHPEPGE PVLVCEGYAT GASLHMATSQ AVAIAFDAGN LMAVAKHMRE RFPGRSIIIC RDDDWKTKRP TGEPWNPGEE KANNAAVVVG GQVVGPIFSA EREVKWTDFN DLHCAEGLEA VRRQVTAVIK PPATGGWKDM LARTESGALI AHMQNVELIL ANDERWSGVI GYNAFSSKIM RLRAAPYGGV PGEWSDIDDM RVMKWLAQQG LRVKASHVVE AVSVVAHDNA FHPVCTYLAR LEWDRVPRLE RWLHEIFGVP RNEYSSKVGK RWMISAVARV MKPGCKADAV LILEGAQGAG KSSALGVLGG DWFMDTPFTL GDKDAFQAIR GKWIVELGEL DSFNKAESTK AKQFFSASID TYRESYGRRT SDVPRQCVFA GTTNQDEYLK DATGNRRYWP VACVKVDLEA LRRARDQLWA EAMFCYQAGD IWWVTREEEE LFTAEQEERF VVDEWEGPIL KWLEESQAGE TVTGSEVLGQ ALNLDPGHWG KPEQMRVGSI MHRLGWRRRR LAALPKSGKR PWAYQKPDGW GRSALEQSTQ PKEECF
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