Gene PP_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3026 
Symbol 
ID1043197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3412988 
End bp3414613 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content57% 
IMG OID637146448 
Productphage recombinase, putative 
Protein accessionNP_745170 
Protein GI26989745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0613972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGT CTCAGGGAGT GGTCTACAGC TATCTTCGGT TCTCCGACCC GCGCCAGGCG 
GCTGGGAATA GTGCGGACAG GCAGGCGGAG TATGCGAAGT CCTGGGCTGC AGCAAGGGGG
CTTACGCTAG ATGAGTCGCT TTCTTTGAGG GATGAGGGCC TGTCTGCATT CCACCAACGG
CACATTAAAC AAGGTGCCTT AGGCGTTTTC CTTCAGGCTG TTGACGAGGG GCGCATCCCG
GCCGGCTCCG TCTTGGTGGT TGAAGGCCTG GACCGTCTGA GCCGGGCGGA ACCCATACAG
GCGCAAGCGC AGCTGGCTCA GATCATCAAC GCGGGGATTA CCGTGGTCAC TGCGAGTGAC
GGCCGTGAGT ACAACAGGGA AAGGCTGAAA GCGCAGCCAA TGGACCTGGT TTATAGCCTT
CTGGTCATGA TCCGGGCTCA CGAAGAGAGC GATACCAAAA GCAAGCGTGT GAAAGCCTCG
ATCAAGCGCT TGTGTGACGG GTGGGTTGCT GGCCATTACC GTGGCTTGAT CCGCAATGGC
AGCGATCCTC GCTGGGTGCG TCTTGTCGAC GGTCACTGGG AGCTGATTCC CGAGCGCGTG
GAAGTTGTGC GGTTTGCCAT AGACAAGTAT CGGGAAGGAC ATGGTGCTGA TCGAGCGCAT
GCGATGATGC AAGAACGGGG CTTCGATACC TCCTATCTCG GAATCTCTCC CCAGCAAATC
TATCGTTTGA TCAAGTTGGT GGCTTTAAAA GGGGCGAAGC AGATTTCCGT CGACGGTGAA
GACTTTCTTC TGAAAGATTA TTATCCACGG CTACTTACTG ATGTTGAATT CGACGAGTTG
CAACTGCTGC GAGGTCAACG AAGCCGTCGA CGAGGAAAGG GCGCCATTCC TGGAGTCGTG
ACTGGAATCG GTATTACCTA CTGTGGCTAC TGCGGCACGC CAATGACTGC GCAAAATGTG
ATGCATAAGG TTCGCTCCGA TGGAACCTTG ATGGATGGGC ATCGGCGTAT CATGTGCATG
TCTTACATGA ACAAAGGGGG GTGTGATGTT GGCGGAAGCT GCAGCGTGGC TCCTGTCGAA
CGGGCTGTCA TGTCATTTTG CTCCGATCAG ATGAACTTGC TGCGCTTACA GCAGCCCGTA
GGACCGAGCG GTGATCTGCA GCAAGGGGTA ATGATCTCGC GAAAACACGT AGTTGATCTC
GAAGCGCAGC TTGGCCGGAT TACTGAGGCT CTGGCATTGG GGGAGGGCGA TGGGGTACTG
CCGATTACGT TCCTACGAAA AGCCCGCGAT CTCGAAGAGC AACTGACTGC CGCCAAAGCA
AAGCTGCATC AGGAAGAGCG AGAACTGGCC GGCATCGCCT CCAGGCAAAG GCCCGCGGAT
GCTAGGGCAT GGTTGGATCT GGCTGCTGGT GTCGAGGCGC AAGAAGTCGA GGCGCGGGAT
AAGGTTCGCC AGTTGATGAT CGATACTTTC GATCGCATCG TGATTTACAT GCGTGGTGTA
GTGCCAGCGG GGCGCAGGGC CAGGTACATC GATGTCTTGC TGATTTCCAA GGCAGGACAG
CGGCGATGGC TCAGGGTAGA AAGGAAGACC GGAGAGTGGG CGGCCGGCGT CGACCGCCCA
GACTGA
 
Protein sequence
MQASQGVVYS YLRFSDPRQA AGNSADRQAE YAKSWAAARG LTLDESLSLR DEGLSAFHQR 
HIKQGALGVF LQAVDEGRIP AGSVLVVEGL DRLSRAEPIQ AQAQLAQIIN AGITVVTASD
GREYNRERLK AQPMDLVYSL LVMIRAHEES DTKSKRVKAS IKRLCDGWVA GHYRGLIRNG
SDPRWVRLVD GHWELIPERV EVVRFAIDKY REGHGADRAH AMMQERGFDT SYLGISPQQI
YRLIKLVALK GAKQISVDGE DFLLKDYYPR LLTDVEFDEL QLLRGQRSRR RGKGAIPGVV
TGIGITYCGY CGTPMTAQNV MHKVRSDGTL MDGHRRIMCM SYMNKGGCDV GGSCSVAPVE
RAVMSFCSDQ MNLLRLQQPV GPSGDLQQGV MISRKHVVDL EAQLGRITEA LALGEGDGVL
PITFLRKARD LEEQLTAAKA KLHQEERELA GIASRQRPAD ARAWLDLAAG VEAQEVEARD
KVRQLMIDTF DRIVIYMRGV VPAGRRARYI DVLLISKAGQ RRWLRVERKT GEWAAGVDRP
D