| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2997 |
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| Symbol | |
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| ID | 1043072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3393504 |
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| End bp | 3394403 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146419 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_745141 |
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| Protein GI | 26989716 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00848262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTACCC TGGAGGCCCT GCCCGAACCC AAGCTGCTGC AGCTGTTCGA CGTGCTGTAT
CAATGCCGCA GCGTGACCCG CGCCGCCGAA CAGCTGGGGC AGAGCCAGCC GACCATCAGC
ATCTGGCTGG CGCGCCTGCG CGAGCAATTG AACGACCCGC TGTTCGTGCG CACGCCAGGC
GGCATGGCCC CTACCCCGCG CGCCGATCAG CTGATAGGGC CGTGCCGCGA GGTGCTGGAA
TCGCTGCGCC GGCTGACCGC CTGGGAGCCG CAGTTCATCG CCGCCACAGC GCAGCGGCGT
TTTCGCCTGT GTGTCAGCGA TGCCAGCCAC ATCACCTTGC TGCCCAGCAT CCTCAACCAT
CTGCGCAGCC ATGCGCCGGG CATCCGCCTG GAGGCGGCGC GGATCGACGG CAATACCGAG
AGCGCGCTGG AATCGGGCGA AGCGGACCTG GCCATCGGCT TCGTGCCCTG GTTGGGCGGG
GGGATGTATC AACAGGTGCT GTTCGAGCAG GACTGGGTGT GCCTGAGCAA CCCGCAGCAT
CCGCGCCTGG GCGATGGCAT GAGCCTGGAG CGGTATCGGG CCGAGGGGCA TGTGCAGATC
AGTTTCGGCA CCGGGCAGAA GCTGCTGGAA GCGGGATTGG CGCGGGCCGG GATCGAACGG
CGGATCATGC TCGAGCTGCC AGCGTTTCTC GGGCTGGGGA AGATAATCGG GACTACCGAC
CTACTGGGCA CCTTGCCGCG GCATATCGGG CAGACACTGG CCGATATGCA TGGGCTACAG
GTCCATGACT GCCCGTTCGA AGTGGAGGGA TTCACGGTCA AACAGCATTG GCACGCCCGC
TATCATCAGG ACAATGGAAA TCGATGGTTG AGGGAGGTCG TTCGCGGATT GTTCCAGTGA
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| Protein sequence | MTTLEALPEP KLLQLFDVLY QCRSVTRAAE QLGQSQPTIS IWLARLREQL NDPLFVRTPG
GMAPTPRADQ LIGPCREVLE SLRRLTAWEP QFIAATAQRR FRLCVSDASH ITLLPSILNH
LRSHAPGIRL EAARIDGNTE SALESGEADL AIGFVPWLGG GMYQQVLFEQ DWVCLSNPQH
PRLGDGMSLE RYRAEGHVQI SFGTGQKLLE AGLARAGIER RIMLELPAFL GLGKIIGTTD
LLGTLPRHIG QTLADMHGLQ VHDCPFEVEG FTVKQHWHAR YHQDNGNRWL REVVRGLFQ
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