Gene PP_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2951 
Symbol 
ID1042944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3355262 
End bp3355828 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID637146373 
ProductTetR family transcriptional regulator 
Protein accessionNP_745095 
Protein GI26989670 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00777364 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGATA CACGCGAAAA AATCCTGGCG ACTGCCGAGA AGCTTATTTA CGAAAACGGG 
ATTCACGCCA CGGGCATGGA CCTCTTGGTA AAGACCTCGG GTGTCGCCCG TAAAAGTATT
TATCGCTATT TTGCGAATAA AGACGACGTA GCAGCGGCGG CACTCAATGC ACGCGATATA
CGCTGGATGA CGTGGTTCAG AAGTGAATGC GAAAAAGCGC AAACGCCAGA AGCACGCATC
CTTGGCATTT TTGATGCCCT CAAAAGTTGG TTCGAGTCAG ACGGTTTTCG CGGATGTGCT
TTTATCAACA CCGCCGGAGA GGTGGGTAAC GCAGACGATC CTGTTCGACA GATCGCAAAA
CTGCATAAAC AAAAGCTGCT GGACTACACG CTAGAACTGA CCAGCGAATT AGGTGTTAAC
GATCCGACTG GCTTGGCCAA GCAACTCCTT TTGATTATAG AGGGCACCAT AACCGTGGCC
CACGTCATGG GTGATCACAC CGCGCTCGAC AGTGCGCGGG AAATCGCAAA GGTCTTGCTC
AAGGACGTGC AGCGCGCAAG CGCTTGA
 
Protein sequence
MTDTREKILA TAEKLIYENG IHATGMDLLV KTSGVARKSI YRYFANKDDV AAAALNARDI 
RWMTWFRSEC EKAQTPEARI LGIFDALKSW FESDGFRGCA FINTAGEVGN ADDPVRQIAK
LHKQKLLDYT LELTSELGVN DPTGLAKQLL LIIEGTITVA HVMGDHTALD SAREIAKVLL
KDVQRASA