Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2951 |
Symbol | |
ID | 1042944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3355262 |
End bp | 3355828 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637146373 |
Product | TetR family transcriptional regulator |
Protein accession | NP_745095 |
Protein GI | 26989670 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00777364 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGATA CACGCGAAAA AATCCTGGCG ACTGCCGAGA AGCTTATTTA CGAAAACGGG ATTCACGCCA CGGGCATGGA CCTCTTGGTA AAGACCTCGG GTGTCGCCCG TAAAAGTATT TATCGCTATT TTGCGAATAA AGACGACGTA GCAGCGGCGG CACTCAATGC ACGCGATATA CGCTGGATGA CGTGGTTCAG AAGTGAATGC GAAAAAGCGC AAACGCCAGA AGCACGCATC CTTGGCATTT TTGATGCCCT CAAAAGTTGG TTCGAGTCAG ACGGTTTTCG CGGATGTGCT TTTATCAACA CCGCCGGAGA GGTGGGTAAC GCAGACGATC CTGTTCGACA GATCGCAAAA CTGCATAAAC AAAAGCTGCT GGACTACACG CTAGAACTGA CCAGCGAATT AGGTGTTAAC GATCCGACTG GCTTGGCCAA GCAACTCCTT TTGATTATAG AGGGCACCAT AACCGTGGCC CACGTCATGG GTGATCACAC CGCGCTCGAC AGTGCGCGGG AAATCGCAAA GGTCTTGCTC AAGGACGTGC AGCGCGCAAG CGCTTGA
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Protein sequence | MTDTREKILA TAEKLIYENG IHATGMDLLV KTSGVARKSI YRYFANKDDV AAAALNARDI RWMTWFRSEC EKAQTPEARI LGIFDALKSW FESDGFRGCA FINTAGEVGN ADDPVRQIAK LHKQKLLDYT LELTSELGVN DPTGLAKQLL LIIEGTITVA HVMGDHTALD SAREIAKVLL KDVQRASA
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