| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2948 |
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| Symbol | |
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| ID | 1042935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3352249 |
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| End bp | 3353631 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637146370 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_745092 |
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| Protein GI | 26989667 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.216869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.403502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG ACGGAACGCG AATTCGAACT GTCATGGGTG AAATCCAGTC GCGGATAGCC
TCTCGAACCT ACACACCTGG CGCGAGAATT CCCTCGGTGC GTGCGATGGC TCAGACCATG
CAGGTGTCGG TTTCTACGGT GCTTGAGGCC TATGAAAGGT TGATGGCAGA GGGTGTACTC
AATTCTCGTC CTGGCTCCGG CTTTTACGTA GCCGGGCCAG TGGCGCCCTT GGTACTCACC
GAACTCGGCC CAAGGCTTGA TCGTGAAGTG GACCCGCTGT GGATCTCGCG CCAGTCTCTT
GACACCGCTA GCGATGCATT GAAACCAGGG TGCGGGTGGC TACCTGCCTC CTGGATGTTC
GAAGCCGGCT TGCGCAAAGC ACTTCGCACC GTTGCCCGTT CCGACACGTC GAAACTGACG
GAGTACGCCT CACCACTTGG GCATCTGCCG CTCAGGCAAT TCTTGTCACG GAAGCTGACA
GGCATCGGGA TCGAAGCCCC TCTTGAACAG ATCATGCTCA CTGAGTCCGG CACCCACGCC
ATCGACCTGA TCTGCCGTTT TCTGCTGGAG CCGGGGGACA CTGTGCTGGT CGACGACCCC
TGCTATTTCA ATTTTCACGC ATTGCTGAAA GCGCACAGGG TGAACATCGT AGGCGTTCCC
TACACCGCGA CGGGCCCGGA CATCGATGCT TTTGGCGCTG CCCTGCTCGC GCATTCTCCC
CGGTTGTACA TAACCAATTC AGGTATCCAC AACCCGACCG GCGCTACCCT GTCTCCGGTC
ACGGCACACA GGTTGCTGAA GCTGGCCGAC AACTCCAGCC TGGTGATTGT AGAGGACGAC
ATTTTCGGGG ATTTCGAGAA TGCGCCAGCG CCACGGCTGT CTGCCTTCGA TGGCCTCTCT
CGTGTCATCC AGATCGGTAG CTTTTCCAAG ACCATCTCCG CTTCGATTCG ATGCGGCTAC
ATCGCGGCTC GCAGTGACTG GATCGAGAGC CTGGTCGATC TCAAGATTGC GACCACATTC
GGGGGTGGCC GCCTGGCCGC GGACATCATC CATCTGGCGA TTACCGATAG CGGGTACCGG
AAACACATGG AAAGTGTTCG CCTCAGGCTG GCAGAGGCTA TGGACAGAAC GGTGGCGAGG
CTTCAAGCCA TTGGTATCAA GCCCTGGATA ACGCCCCAGT CAGGCATGTA CGTCTGGTGC
CAACTTCCTC AAGGCAAGGA TGCAGCAACG CTGGCTCGGG CTTGCTTGAA TGAAGGTGTA
GTACTGGCGC CCGGAAATGC GTTCAGCCAG TCGATGGCTG CGGGTGATTT CCTCCGTTTC
AATGTCGCCC AATCGGCTGA TGCCAAAATT TACGAAGTAT TGAAACGGAC ACTGAGCGCT
TAG
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| Protein sequence | MKRDGTRIRT VMGEIQSRIA SRTYTPGARI PSVRAMAQTM QVSVSTVLEA YERLMAEGVL
NSRPGSGFYV AGPVAPLVLT ELGPRLDREV DPLWISRQSL DTASDALKPG CGWLPASWMF
EAGLRKALRT VARSDTSKLT EYASPLGHLP LRQFLSRKLT GIGIEAPLEQ IMLTESGTHA
IDLICRFLLE PGDTVLVDDP CYFNFHALLK AHRVNIVGVP YTATGPDIDA FGAALLAHSP
RLYITNSGIH NPTGATLSPV TAHRLLKLAD NSSLVIVEDD IFGDFENAPA PRLSAFDGLS
RVIQIGSFSK TISASIRCGY IAARSDWIES LVDLKIATTF GGGRLAADII HLAITDSGYR
KHMESVRLRL AEAMDRTVAR LQAIGIKPWI TPQSGMYVWC QLPQGKDAAT LARACLNEGV
VLAPGNAFSQ SMAAGDFLRF NVAQSADAKI YEVLKRTLSA
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