Gene PP_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2946 
Symbol 
ID1042913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3351062 
End bp3351475 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content61% 
IMG OID637146368 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionNP_745090 
Protein GI26989665 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.661173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.230853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTA TCTCCAATAA CGTGCATCTG CCAGATGCCG AAATCGAACT CACATACATC 
CGCGCGCAAG GCGCGGGTGG GCAGAATGTC AACAAAGTGT CCAGCGCGGT ACACCTACGC
TTCGACATCC CGGCCTCATC GTTGCCCGAG TTTTACAAGG CGCGGCTGCT GGCGCTGCGT
GACAGTCGCA TCACCGGCGA CGGCGTGTTG ATCATCAAGG GCCAGCAGTA CCGCACCCAG
GAGCAGAACC GTGTTGACGC ATTGGCGCGT CTTGCCGAGT TGATCATCAC CGCAGGCAAG
ACTGAAAAGA AACGCCGCCC CACCAAGCCG ACCCTCGGCT CGAAGACCCG CCGCCTCGAA
GGAAAAGCCA GGCGGAGCAC TGTCAAGGCG GGGCGGGGGA AGGTGGAGTT CTAG
 
Protein sequence
MLTISNNVHL PDAEIELTYI RAQGAGGQNV NKVSSAVHLR FDIPASSLPE FYKARLLALR 
DSRITGDGVL IIKGQQYRTQ EQNRVDALAR LAELIITAGK TEKKRRPTKP TLGSKTRRLE
GKARRSTVKA GRGKVEF