Gene PP_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2945 
Symbol 
ID1042914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3349387 
End bp3350904 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content58% 
IMG OID637146367 
Productsensor histidine kinase/response regulator 
Protein accessionNP_745089 
Protein GI26989664 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.16803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCCTG GCCGCCATCG AGATGAATGG TCACCTGACC GCACACAGCG ACGGCCCTGG 
CTTGGGTGCT GTCTTTACCC TGAGGATCCC GCTGATCGCG GTGACGGAGC CTGCATGAGT
GACATGATCA ATCGCCGGAT CCTGCTGATC GATGACATGC CGACTATCCA CGAGGACTTT
CGCAAGATCC TTGCCCCGGC CAGATCGCAG AACTCTGAGC TGGACGAGAT GGAAGGGTTG
TTGTTCGGCG AGCAGGTCAA GAACGAACGA CCGGTATTCG AACTCGATTC AGCCTATGGC
GGTGAGGAAG GTCTCGGCCT GCTGAAGCGT GCGCTGCAGG CCAGCAAGCC CTACGCGTTA
GCCTTTGTCG ACATGCGAAT GCCAGGTGGA TGGGATGGCG CTCAGACCAT TGAGCACCTG
TGGGAAGAGG ACCCGCTGTT GCAGGTAGTC GTCTGCACTG CCTACTCGGA CTATTCCTGG
GATGAGTTGC TCGACCGGCT GCAGGCCCAC GATCGCTTGC TGATCCTGAA AAAACCGTTC
GACAACATCG AGGTCCAGCA AATGGCCAGC ACCTTGCTGA CCAAGTGGGA AATGACCCAA
CGAGCCTCGC TGAAAATGCA CCAGCTCGAA CAGCGGGTAG AGCGGCGTAC CCAGCAACTG
ACCCAGGCCA GCGAGGCGCT GCAGCAGGAG ATCGAGGAGC GCAAGCAGCT GGAAAGCCAA
CTGGTGCAAT CGGAGAAGCT CGCCTCGTTG GGGCAGATGG CCGCCGGCGT GGCGCACGAG
ATCAACAATC CGATCGGTTT CGTGTCCTCC AACCTGGGCA CTCTGGGAGG GTACTTCCAG
CAACTGGTAG CGATGCTCGA CGCCTATCGC GAGGCCGAAC TGATGCTCGG CGCAAACGAA
ACCACTGGGC GCTTGCAAAG GCTTCGTGAG CAGACGGAAC TGGAGTTCCT CATGGAAGAC
ATCCCGATCC TCATCAAGGA GTCCAAGGAC GGAATCGGTC GAGTGGCGCA TATCGTCAAG
GACCTCAAAG ACTTCTCGCG CGTTGATAGC GCTCAGCAGT GGCAATTAGC CGATTTGCAG
CAGGGCATTG ACTCCACGCT TAACATCGTC GCGAGCGAGC TGAAACATAA AGCCGACCTG
GTAAAACGGT ACCAGCCGTT ACCCCCTGTC GAATGCCTGC CGTCGCAGAT CAACCAAGTG
ATAATGAACC TGGTGCTCAA CGCCGCCCAA GCCATGGGCC CCGAGCGGGG CACCATCACA
TTGGGCACTG CTCATCAAGG CGCCTGGGTG TGCATCGAAG TTGCAGATAC AGGCGCGGGG
ATAGCACCGG AGAACATCAA GAAAATCTTC GATCCTTTTT TCACCACCAA GCCCGTCGGC
CAAGGTACCG GGCTAGGCCT GTCCCTTTCC TATGGCATTG TAAAGAAACA CGGTGGGGAG
ATAACCGTAT CAAGCCAGGT CGGAGTGGGA ACAACGTTTC GTGTACAACT GCCGGTAAAG
CAGAGCGCAA CGCTGTGA
 
Protein sequence
MRPGRHRDEW SPDRTQRRPW LGCCLYPEDP ADRGDGACMS DMINRRILLI DDMPTIHEDF 
RKILAPARSQ NSELDEMEGL LFGEQVKNER PVFELDSAYG GEEGLGLLKR ALQASKPYAL
AFVDMRMPGG WDGAQTIEHL WEEDPLLQVV VCTAYSDYSW DELLDRLQAH DRLLILKKPF
DNIEVQQMAS TLLTKWEMTQ RASLKMHQLE QRVERRTQQL TQASEALQQE IEERKQLESQ
LVQSEKLASL GQMAAGVAHE INNPIGFVSS NLGTLGGYFQ QLVAMLDAYR EAELMLGANE
TTGRLQRLRE QTELEFLMED IPILIKESKD GIGRVAHIVK DLKDFSRVDS AQQWQLADLQ
QGIDSTLNIV ASELKHKADL VKRYQPLPPV ECLPSQINQV IMNLVLNAAQ AMGPERGTIT
LGTAHQGAWV CIEVADTGAG IAPENIKKIF DPFFTTKPVG QGTGLGLSLS YGIVKKHGGE
ITVSSQVGVG TTFRVQLPVK QSATL