Gene PP_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2925 
Symbolmqo-3 
ID1042853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3325245 
End bp3326864 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content61% 
IMG OID637146347 
Productmalate:quinone oxidoreductase 
Protein accessionNP_745069 
Protein GI26989644 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCATCAAGCC AAAACTGGCG ATGGCCGGGC TGGCCTTGGC CATCGGCATG 
CTCAATGCCC AAGCGGCGGA AACCCGAAAG GTCGATGTGC TGCTTGTGGG CGGCGGCATC
ATGAGTTCTA CCTTGGCCGT GTGGCTCAAC GAGCTGGAGC CCGGCTGGTC GATGGAAATG
GTCGAGCGCC TGGACAAGGT GGCCGAGGAG AGCTCCAACG GCTGGAACAA CGCCGGCACC
GGCCACTCGG CCCTGGCGGA GCTGAACTAC ACCCCGGAAA AAGACGGCAA GATCGACATC
AGCAAGGCAG TTGAAATCAA CGAGTCGTTC CAGGTAACGC GCCAGTTTCT CGCCTGGCAG
GTCAAGCAGG GCGTGCTGAA AAACCCGCAT TCGTTCATCA ACACCACCCC GCACATGAGC
TTTGTCTGGG GCGATGACAA TATCCGCTTC CTGAAGAAGC GCTACGAGGC GCTGCAGGCC
AGCCCCCTGT TCAAACCCAT GCAGTACTCC GAAGACCACG AGCAGATCCG CAAATGGGTC
CCGCTGATGA TGGAAGGCCG CGATCCCAAC CAGAAGCTGG CCGTGACCTG GACGCCGATC
GGCACCGACG TCAACTTTGG CGAGATCACC CGGCAGTATG TGGGTTACCT GCAGACGCGG
CCGAACTTCG ATCTCAAGCT GTCGAGCGAA GTGCAGGACA TCACCCGTAA CGACGACGGT
TCCTGGCACG TCGAGTACAA GAATCTGAAG AATGGCAGCA AGGCAGCCAC CGATGCCCGG
TTCCTGTTCA TCGGCGCTGG CGGGGCGGCA CTGCCGCTGC TGCAGAAGTC GGGTATCGAC
GAGGCCAAGA ACTATGGCGG CTTCCCGGTC GGTGGCTCGT TCCTGGTCAC TGACAACCCG
GCTATCGCCC AGCGCCACAT GGCCAAGGCC TATGGCATTG CCGCAACCGG TGCGCCGCCC
ATGTCGGTGC CGCACTTGGA CACCCGGGTA CTTGATGGCA AGCGCCTGAT CCTGTTTGGG
CCGTTTGCCA CCTTCTCGAC CAAGTTCCTC AAGCAGGGCT CATTGCTTGA CCTGCTCGCC
AGTACCAGCG TGCACAATGC CTGGCCGATG GTGCGGGTAG GGGTACGCGA GTTCGACCTG
GTGCAGTACC TGATCGGGCA GGTGCTGCAA TCGGACGATG ACCGCTTCGA AGCGCTGCGC
ACCTACTTCC CCGAGGCGAA GAAAGAAGAC TGGCGGCTGT GGCAGGCGGG CCAGCGGGTG
CAAATCATCA AGAAAGACGA AGCGTTGGGC GGCGTGCTCA AGCTCGGTAC CGAGGTGGTG
ACGTCCAGGG ACGGCAGTAT CGCCGGCTTG CTGGGGGCCT CTCCCGGTGC GTCGACCGCT
GCGCCTATCA TGCTCGATGT GTTGAACAAG GTGTTCAAGA ACAAGGTGGC GTCGCCCGAG
TGGCAGGCCA AGATCAAACA GATCATCCCG TCCTATGGCA TCCGCCTGAA CGACCACCCG
GATCAGCTAG AGAAGGAGTG GGCATATACC AACGAGGTGC TGCAGCTTGA GCCGCCTGTC
AGTCCGCAGC GCCCTGAGTC GATAAGGCCG GCTGACAGCC AGGGAGTGGC CAGCCGGTAA
 
Protein sequence
MKITIKPKLA MAGLALAIGM LNAQAAETRK VDVLLVGGGI MSSTLAVWLN ELEPGWSMEM 
VERLDKVAEE SSNGWNNAGT GHSALAELNY TPEKDGKIDI SKAVEINESF QVTRQFLAWQ
VKQGVLKNPH SFINTTPHMS FVWGDDNIRF LKKRYEALQA SPLFKPMQYS EDHEQIRKWV
PLMMEGRDPN QKLAVTWTPI GTDVNFGEIT RQYVGYLQTR PNFDLKLSSE VQDITRNDDG
SWHVEYKNLK NGSKAATDAR FLFIGAGGAA LPLLQKSGID EAKNYGGFPV GGSFLVTDNP
AIAQRHMAKA YGIAATGAPP MSVPHLDTRV LDGKRLILFG PFATFSTKFL KQGSLLDLLA
STSVHNAWPM VRVGVREFDL VQYLIGQVLQ SDDDRFEALR TYFPEAKKED WRLWQAGQRV
QIIKKDEALG GVLKLGTEVV TSRDGSIAGL LGASPGASTA APIMLDVLNK VFKNKVASPE
WQAKIKQIIP SYGIRLNDHP DQLEKEWAYT NEVLQLEPPV SPQRPESIRP ADSQGVASR