Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2920 |
Symbol | |
ID | 1042851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3320263 |
End bp | 3321021 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146342 |
Product | hypothetical protein |
Protein accession | NP_745064 |
Protein GI | 26989639 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.9923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG TGGATTTCAA CTCGGACATG GGTGAGGGCT TTGGCCCGTG GACCATTGGC GATGGCGTCG ACAATGAGCT GATGGGTTAC ATCAGCAGCG CCAACATCGC CACTGGTTTC CATGCCGGCG ACCCCGGCAC CATGCGCCGC ACCGTCGAGC GCGCCAAGGC ACTGGGCGTC GCTGTGGGGG CACACCCGGG GTTCCGTGAC CTGGTCGGCT TTGGCCGCCG GCATATCAAT GCCTCGGCGC AGGAACTGGT GGACGACATG CTCTATCAAT TGGGCGCGCT GCGTGAAATC GCTCGTGCCC AGGGCGTGCG CCTGCAGCAC ATCAAGCCGC ATGGGGCGCT TTACATGCAC TTGGCGCGTG ACGAAGAAGC GGCGCGCTTG CTGGTGGAAA ACCTGCGGGT GATCGAGCCC GAGTTGCTGC TGTACTGCAT GCCGGGTTCG GTGATCTGCC GCATTGCCCA GGAACTGGGG CAGCCGGTGA TTCGCGAGTT CTATGCCGAC CGCGAGTACG ACCTGAGCGG GTCGATCGTG TTTACCCGCA ATGTGCGTGG CTACGAGCCC CAAGCCGTCG CCGAGCGGGT ACTGCGTGCT TGTCGCCAAG GCGTTGTGCG CACGGTCGAA GGGCAGGACC TGGCGATCGA ATTCGATTCC ATTTGCCTGC ACAGTGACAC CCCGGGCGCG CTGGACCTGG TCGAGGCCAC GCGCAAGGCA CTGGATGCGG CCGGCATCGT GGTGCGGGCA CCGCGCTGA
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Protein sequence | MQAVDFNSDM GEGFGPWTIG DGVDNELMGY ISSANIATGF HAGDPGTMRR TVERAKALGV AVGAHPGFRD LVGFGRRHIN ASAQELVDDM LYQLGALREI ARAQGVRLQH IKPHGALYMH LARDEEAARL LVENLRVIEP ELLLYCMPGS VICRIAQELG QPVIREFYAD REYDLSGSIV FTRNVRGYEP QAVAERVLRA CRQGVVRTVE GQDLAIEFDS ICLHSDTPGA LDLVEATRKA LDAAGIVVRA PR
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