Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2913 |
Symbol | hemB-1 |
ID | 1042819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3312818 |
End bp | 3313792 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146335 |
Product | delta-aminolevulinic acid dehydratase |
Protein accession | NP_745057 |
Protein GI | 26989632 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.322875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAACC AATTCCCCTC CGTTCGTCCC CGCCGTCTGC GGCAGAACGA GTCCCTGCGC ACGATCTTCC AGGAAACCGA GTTCCGCCTT GAAGACCTGA TCCTGCCGAT CTTCGTCGAA GAGGGCATCG ATGATTTCGT GCCGATCACC AGTATGCCCG GTGTCAACCG TATCCCCGAG AAGCTGCTGG CCCAGGAAAT CGAGCGCTAT GCCCGCGCCG GTATCAAGTC GGTGATGACC TTTGGCGTAT CGCACCACCT GGATGCCGAT GGCAGCGACA CCTGGAACGA AAACGGCCTG GTTGCGCGCA TGTCGCGTAT CTGCAAGGAC ACCGTGCCGG AAATGGTGGT GATGTCCGAC ACCTGCTTCT GCGAATACAC CAGCCACGGC CACTGCGGCG TGCTGCATGA CCATGGCGTG GACAACGACG CCACCCTGGC CAACCTGGGC AAGCAGGCAG TCATTGCCGC TGCTGCCGGT GCCGACTTCA TTGCCCCCTC GGCGGCGATG GACGGCCAGG TGCAGGCTAT CCGCAGTGCC TTGGACGGTG CCGGCTTCCA CGACACCGCG ATCATGGCCT ACTCGACCAA GTTCGCCTCG TCGTTGTATG GCCCGTTCCG TGAGGCCGGC GGCACCGCAC TGAAGGGCGA CCGCAAAAGC TACCAGATGA ACCCGATGAA CCGCCGCGAA GCGGTGCGTG AGTCGCTGCT CGACGAGCAG GAAGGGGCGG ACGTGCTGAT GGTCAAGCCG GCCGGTGCGT ACCTTGATGT GATCGCCGAC ATCCGCGCCG CTTCGCGCCT GCCACTGGCG GCGTACCAGG TGAGTGGCGA GTATGCGATG ATCAAGTTCG GTGGCCTGGC CGGTGCCATC GACGAAGGCC GGGTGGTGCG CGAAAGCATT GGCGCAATCA AGCGTGCTGG TGCAGACCTG ATCCTGACCT ACTTCGCCAT GGACCTGGCG CGCGAAGGTA TCTGA
|
Protein sequence | MSNQFPSVRP RRLRQNESLR TIFQETEFRL EDLILPIFVE EGIDDFVPIT SMPGVNRIPE KLLAQEIERY ARAGIKSVMT FGVSHHLDAD GSDTWNENGL VARMSRICKD TVPEMVVMSD TCFCEYTSHG HCGVLHDHGV DNDATLANLG KQAVIAAAAG ADFIAPSAAM DGQVQAIRSA LDGAGFHDTA IMAYSTKFAS SLYGPFREAG GTALKGDRKS YQMNPMNRRE AVRESLLDEQ EGADVLMVKP AGAYLDVIAD IRAASRLPLA AYQVSGEYAM IKFGGLAGAI DEGRVVRESI GAIKRAGADL ILTYFAMDLA REGI
|
| |