Gene PP_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2913 
SymbolhemB-1 
ID1042819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3312818 
End bp3313792 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID637146335 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionNP_745057 
Protein GI26989632 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.322875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC AATTCCCCTC CGTTCGTCCC CGCCGTCTGC GGCAGAACGA GTCCCTGCGC 
ACGATCTTCC AGGAAACCGA GTTCCGCCTT GAAGACCTGA TCCTGCCGAT CTTCGTCGAA
GAGGGCATCG ATGATTTCGT GCCGATCACC AGTATGCCCG GTGTCAACCG TATCCCCGAG
AAGCTGCTGG CCCAGGAAAT CGAGCGCTAT GCCCGCGCCG GTATCAAGTC GGTGATGACC
TTTGGCGTAT CGCACCACCT GGATGCCGAT GGCAGCGACA CCTGGAACGA AAACGGCCTG
GTTGCGCGCA TGTCGCGTAT CTGCAAGGAC ACCGTGCCGG AAATGGTGGT GATGTCCGAC
ACCTGCTTCT GCGAATACAC CAGCCACGGC CACTGCGGCG TGCTGCATGA CCATGGCGTG
GACAACGACG CCACCCTGGC CAACCTGGGC AAGCAGGCAG TCATTGCCGC TGCTGCCGGT
GCCGACTTCA TTGCCCCCTC GGCGGCGATG GACGGCCAGG TGCAGGCTAT CCGCAGTGCC
TTGGACGGTG CCGGCTTCCA CGACACCGCG ATCATGGCCT ACTCGACCAA GTTCGCCTCG
TCGTTGTATG GCCCGTTCCG TGAGGCCGGC GGCACCGCAC TGAAGGGCGA CCGCAAAAGC
TACCAGATGA ACCCGATGAA CCGCCGCGAA GCGGTGCGTG AGTCGCTGCT CGACGAGCAG
GAAGGGGCGG ACGTGCTGAT GGTCAAGCCG GCCGGTGCGT ACCTTGATGT GATCGCCGAC
ATCCGCGCCG CTTCGCGCCT GCCACTGGCG GCGTACCAGG TGAGTGGCGA GTATGCGATG
ATCAAGTTCG GTGGCCTGGC CGGTGCCATC GACGAAGGCC GGGTGGTGCG CGAAAGCATT
GGCGCAATCA AGCGTGCTGG TGCAGACCTG ATCCTGACCT ACTTCGCCAT GGACCTGGCG
CGCGAAGGTA TCTGA
 
Protein sequence
MSNQFPSVRP RRLRQNESLR TIFQETEFRL EDLILPIFVE EGIDDFVPIT SMPGVNRIPE 
KLLAQEIERY ARAGIKSVMT FGVSHHLDAD GSDTWNENGL VARMSRICKD TVPEMVVMSD
TCFCEYTSHG HCGVLHDHGV DNDATLANLG KQAVIAAAAG ADFIAPSAAM DGQVQAIRSA
LDGAGFHDTA IMAYSTKFAS SLYGPFREAG GTALKGDRKS YQMNPMNRRE AVRESLLDEQ
EGADVLMVKP AGAYLDVIAD IRAASRLPLA AYQVSGEYAM IKFGGLAGAI DEGRVVRESI
GAIKRAGADL ILTYFAMDLA REGI